RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 ERVK-9P63128 1117 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 ERVK-24P63145 666 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 DNM1Q05193 864 aaKnown RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 REM2Q8IYK8 340 aaPredicted RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 TBC1D5Q92609 795 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 MOV10L1Q9BXT6 1211 aaKnown RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 ACAD9Q9H845 621 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 MAP3K20Q9NYL2 800 aaKnown RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 MORF4L1Q9UBU8 362 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 BAG4O95429 457 aaKnown RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 Q3C1V9 767 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 RILPL1Q5EBL4 403 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 ATL3Q6DD88 541 aa25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 ZNF396Q96N95 335 aaPredicted RBP25.02■■□□□ 1.6
EFCAB13-202ENST00000517310 ADGRA2Q96PE1 1338 aa25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 AOC2O75106 756 aa25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 FOSP01100 380 aaPredicted RBP25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 NONOQ15233 471 aaKnown RBP eCLIP25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 TAF1CQ15572 869 aaPredicted RBP25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 GPRC5AQ8NFJ5 357 aa25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 CHAMP1Q96JM3 812 aa25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 FBXO40Q9UH90 709 aa25.01■■□□□ 1.59
EFCAB13-202ENST00000517310 TRAPPC10P48553 1259 aa25■■□□□ 1.59
EFCAB13-202ENST00000517310 ANKRD13CQ8N6S4 541 aa25■■□□□ 1.59
EFCAB13-202ENST00000517310 GBP4Q96PP9 640 aa25■■□□□ 1.59
EFCAB13-202ENST00000517310 NOL7Q9UMY1 257 aaKnown RBP25■■□□□ 1.59
EFCAB13-202ENST00000517310 HOXA13P31271 388 aaPredicted RBP24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 TOB1P50616 345 aaPredicted RBP24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 KRT85P78386 507 aa24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 FAM110CQ1W6H9 321 aa24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 SHCBP1Q8NEM2 672 aa24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 ANO3Q9BYT9 981 aa24.99■■□□□ 1.59
EFCAB13-202ENST00000517310 SPDYE3A6NKU9 549 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 ERCC3P19447 782 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 RPS6P62753 249 aaKnown RBP24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 CCNA1P78396 465 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 INF2Q27J81 1249 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 RNF207Q6ZRF8 634 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 NCAPG2Q86XI2 1143 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 PGBD1Q96JS3 809 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 USP28Q96RU2 1077 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 CFAP45Q9UL16 551 aa24.98■■□□□ 1.59
EFCAB13-202ENST00000517310 MYH7BA7E2Y1 1941 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 ALDH1A1P00352 501 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 NSMFQ6X4W1 530 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 TBCKQ8TEA7 893 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 MROH8Q9H579 483 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 ZFYVE28Q9HCC9 887 aa24.97■■□□□ 1.59
EFCAB13-202ENST00000517310 BCRP11274 1271 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 HTRA3P83110 453 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 SYTL5Q8TDW5 730 aaPredicted RBP24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 A1CFQ9NQ94 594 aaKnown RBP24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 TFIP11Q9UBB9 837 aaKnown RBP24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 CNPY2Q9Y2B0 182 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 TLR2O60603 784 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 NCLP19338 710 aaKnown RBP24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 MAP2K2P36507 400 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 VEGFBP49765 207 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 BAATQ14032 418 aaPredicted RBP24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 SLC30A10Q6XR72 485 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 NEK8Q86SG6 692 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 FCHSD1Q86WN1 690 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 POLR3EQ9NVU0 708 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 CYP39A1Q9NYL5 469 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 RTEL1Q9NZ71 1219 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 COL20A1Q9P218 1284 aa24.96■■□□□ 1.59
EFCAB13-202ENST00000517310 CA12O43570 354 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 TTC38Q5R3I4 469 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 ANO1Q5XXA6 986 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 FTOQ9C0B1 505 aaKnown RBP eCLIP24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 EHMT1Q9H9B1 1298 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 CLIC4Q9Y696 253 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 THSD7BQ9C0I4 1608 aa24.95■■□□□ 1.58
EFCAB13-202ENST00000517310 SREBF1P36956 1147 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 NASPP49321 788 aaPredicted RBP24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 NBR1Q14596 966 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 C17orf99Q6UX52 265 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 CRYGNQ8WXF5 182 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 SCAND2PQ9GZW5 306 aaPredicted RBP24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 PORCNQ9H237 461 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 R3HDMLQ9H3Y0 253 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 CPA4Q9UI42 421 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 PCDHB6Q9Y5E3 794 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 PFASO15067 1338 aa24.94■■□□□ 1.58
EFCAB13-202ENST00000517310 WNT7AO00755 349 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 EDIL3O43854 480 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 ATP2B1P20020 1258 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 CRHR2Q13324 411 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 SF3A1Q15459 793 aaKnown RBP24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 ANKRD35Q8N283 1001 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 EFCC1Q9HA90 598 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 FRMPD4Q14CM0 1322 aa24.93■■□□□ 1.58
EFCAB13-202ENST00000517310 LCTP09848 1927 aa24.92■■□□□ 1.58
EFCAB13-202ENST00000517310 FIBPO43427 364 aa24.92■■□□□ 1.58
EFCAB13-202ENST00000517310 YEATS4O95619 227 aa24.92■■□□□ 1.58
EFCAB13-202ENST00000517310 USP11P51784 963 aa24.92■■□□□ 1.58
EFCAB13-202ENST00000517310 CEBPZQ03701 1054 aaKnown RBP24.92■■□□□ 1.58
EFCAB13-202ENST00000517310 RCOR1Q9UKL0 485 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms