RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 C7orf72A4D263 438 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 NPIPB6E9PJ23 425 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 MPOP05164 745 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 DBHP09172 617 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 PAMP19021 973 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 GLDCP23378 1020 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 RAB33AQ14088 237 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 BICRALQ6AI39 1079 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 NPLOC4Q8TAT6 608 aa8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 SMG5Q9UPR3 1016 aaKnown RBP8.31□□□□□ -1.08
SCARNA1-201ENST00000517138 CAPNS1P04632 268 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 CFPP27918 469 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 ECI1P42126 302 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 DENND5AQ6IQ26 1287 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 EEPD1Q7L9B9 569 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 TMC6Q7Z403 805 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 C1QL4Q86Z23 238 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 CCDC103Q8IW40 242 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 CRACR2BQ8N4Y2 399 aaPredicted RBP8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 KREMEN2Q8NCW0 462 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 DPF3Q92784 378 aa8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 ARID1BQ8NFD5 2236 aaPredicted RBP8.3□□□□□ -1.08
SCARNA1-201ENST00000517138 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 A0A1W2PQU0 124 aa8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 STK10O94804 968 aaKnown RBP8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 CDR1P51861 262 aa8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 PLEKHN1Q494U1 663 aaPredicted RBP8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 C8orf37Q96NL8 207 aa8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 MTA3Q9BTC8 594 aa8.29□□□□□ -1.08
SCARNA1-201ENST00000517138 ZC3H12DA2A288 527 aaKnown RBP8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 TCAF2A6NFQ2 919 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 SEMA7AO75326 666 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 SNRPB2P08579 225 aaKnown RBP8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 NCKAP1LP55160 1127 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 PPP2R2AP63151 447 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 SSPNQ14714 243 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 CBX2Q14781 532 aaPredicted RBP8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 KCNA10Q16322 511 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 KRTAP9-9Q9BYP9 154 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 KRTAP9-4Q9BYQ2 154 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 BCAS3Q9H6U6 928 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 SIRT5Q9NXA8 310 aa8.28□□□□□ -1.08
SCARNA1-201ENST00000517138 A0A1W2PQJ5 194 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 HRKO00198 91 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 GLI4P10075 376 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 CORO7P57737 925 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 ANKLE2Q86XL3 938 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 TMEM145Q8NBT3 493 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 PANK1Q8TE04 598 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 C1orf159Q96HA4 380 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 MMP19Q99542 508 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 FBXL7Q9UJT9 491 aa8.27□□□□□ -1.09
SCARNA1-201ENST00000517138 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 LCP1P13796 627 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 HOXC12P31275 282 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 GTF2F1P35269 517 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 GFRA1P56159 465 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 LINC00310P59036 64 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 ZNF200P98182 395 aaPredicted RBP8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 FZD5Q13467 585 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 PAQR3Q6TCH7 311 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 LDHDQ86WU2 507 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 BTG4Q9NY30 223 aa8.26□□□□□ -1.09
SCARNA1-201ENST00000517138 F8W031 263 aaPredicted RBP8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 FUCA1P04066 466 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 CYBBP04839 570 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 SCG5P05408 212 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 KCNJ6P48051 423 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 IGDCC3Q8IVU1 814 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 TEX2Q8IWB9 1127 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 LRRC56Q8IYG6 542 aaPredicted RBP8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 PLEKHO2Q8TD55 490 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 TRIM55Q9BYV6 548 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 EPB41L4AQ9HCS5 686 aaPredicted RBP8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 SIT1Q9Y3P8 196 aa8.25□□□□□ -1.09
SCARNA1-201ENST00000517138 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 NPHS1O60500 1241 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 PRR5P85299 388 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 ZC3H14Q6PJT7 736 aaKnown RBP8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 LCNL1Q6ZST4 164 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 SPATC1Q76KD6 591 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 CKAP2LQ8IYA6 745 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 EPN3Q9H201 632 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 MSRB2Q9Y3D2 182 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 PCDHA5Q9Y5H7 936 aa8.24□□□□□ -1.09
SCARNA1-201ENST00000517138 TRBV23OR9-2A0A075B6M9 112 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 ABLIM1O14639 778 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 N4BP3O15049 544 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 FPR2P25090 351 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 NR1I3Q14994 352 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 YOD1Q5VVQ6 348 aaPredicted RBP8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 TMEFF1Q8IYR6 380 aa8.23□□□□□ -1.09
SCARNA1-201ENST00000517138 RCBTB1Q8NDN9 531 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms