RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 FAM217BQ9NTX9 383 aaPredicted RBP6.25□□□□□ -1.41
SCARNA16.4-201ENST00000516956 VPS54Q9P1Q0 977 aa6.25□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ZNF536O15090 1300 aa6.25□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ADGRA2Q96PE1 1338 aa6.25□□□□□ -1.41
SCARNA16.4-201ENST00000516956 VPS37CA5D8V6 355 aaPredicted RBP6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 STXBP3O00186 592 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MARCH6O60337 910 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 JAK2O60674 1132 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PEX10O60683 326 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PGK2P07205 417 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 HSPA8P11142 646 aaKnown RBP6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 KRT2P35908 639 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 UBXN2AP68543 259 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PDE4DQ08499 809 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NTRK3Q16288 839 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MUM1L1Q5H9M0 696 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 BLIDQ8IZY5 108 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NSUN6Q8TEA1 469 aaKnown RBP6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 RMDN3Q96TC7 470 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 APBA2Q99767 749 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 R3HDMLQ9H3Y0 253 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 RIC8AQ9NPQ8 531 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CYP39A1Q9NYL5 469 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SRRDQ9UH36 339 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 TCEAL9Q9UHQ7 104 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NOL7Q9UMY1 257 aaKnown RBP6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CNPY2Q9Y2B0 182 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 RIPK3Q9Y572 518 aa6.24□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PTPRFP10586 1907 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ESYT2A0FGR8 921 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NFIBO00712 420 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ADCY3O60266 1144 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PPP1R11O60927 126 aaPredicted RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CD2BP2O95400 341 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MYCLP12524 364 aaPredicted RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 EIF2AK2P19525 551 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CNGA1P29973 690 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CCND2P30279 289 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 HOXA13P31271 388 aaPredicted RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 FLT3LGP49771 235 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 RPS6P62753 249 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 GUCY1B3Q02153 619 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PRKCZQ05513 592 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 FUT2Q10981 343 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 AP3B2Q13367 1082 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CUL4AQ13619 759 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 GRB14Q14449 540 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 STXBP2Q15833 593 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 GNPTABQ3T906 1256 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 JAKMIP3Q5VZ66 844 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 KRT40Q6A162 431 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 USP17L6PQ6QN14 398 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 KRT25Q7Z3Z0 450 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SLAIN1Q8ND83 568 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 DNERQ8NFT8 737 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NAP1L4Q99733 375 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ARHGAP39Q9C0H5 1083 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ZMYND12Q9H0C1 365 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 A1CFQ9NQ94 594 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PRDM10Q9NQV6 1147 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PCDHA4Q9UN74 947 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 KCNJ14Q9UNX9 436 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 DIS3Q9Y2L1 958 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 THSD7BQ9C0I4 1608 aa6.23□□□□□ -1.41
SCARNA16.4-201ENST00000516956 LOC102724159A0A0B4J2E5 919 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PIK3CDO00329 1044 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CTDNEP1O95476 244 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MMP1P03956 469 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 XRCC5P13010 732 aaKnown RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 TAL1P17542 331 aaPredicted RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 GRK4P32298 578 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 HSD17B4P51659 736 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CNTN2Q02246 1040 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 IRF5Q13568 498 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NONOQ15233 471 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PWP2Q15269 919 aaKnown RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PKN1Q16512 942 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 UBE2SQ16763 222 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MORN1Q5T089 497 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 XRRA1Q6P2D8 792 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SLC30A10Q6XR72 485 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 OTOP1Q7RTM1 612 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 NLRX1Q86UT6 975 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 DIS3L2Q8IYB7 885 aaKnown RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 MSL3Q8N5Y2 521 aaKnown RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SYTL5Q8TDW5 730 aaPredicted RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 CLEC4DQ8WXI8 215 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 IWS1Q96ST2 819 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ANO3Q9BYT9 981 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 SPC25Q9HBM1 224 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 ZHX1Q9UKY1 873 aaPredicted RBP6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PCDHA6Q9UN73 950 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PTPN22Q9Y2R2 807 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
SCARNA16.4-201ENST00000516956 DTNBO60941 627 aa6.21□□□□□ -1.42
SCARNA16.4-201ENST00000516956 EIF3JO75822 258 aaKnown RBP6.21□□□□□ -1.42
SCARNA16.4-201ENST00000516956 STAM2O75886 525 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms