RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 GJC2Q5T442 439 aaPredicted RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
SUB1-213ENST00000515355 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 KCNB2Q92953 911 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 FGD4Q96M96 766 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 RIOX1Q9H6W3 641 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
SUB1-213ENST00000515355 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
SUB1-213ENST00000515355 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 AKR1A1P14550 325 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 HOXA13P31271 388 aaPredicted RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 PDE4DQ08499 809 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 MAMDC4Q6UXC1 1216 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 FBXO16Q8IX29 292 aaPredicted RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 MSL3Q8N5Y2 521 aaKnown RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 MPHOSPH6Q99547 160 aaKnown RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 ABHD16BQ9H3Z7 469 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
SUB1-213ENST00000515355 MKI67P46013 3256 aaKnown RBP13.34□□□□□ -0.27
SUB1-213ENST00000515355 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
SUB1-213ENST00000515355 SEC24BO95487 1268 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 PGK1P00558 417 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
SUB1-213ENST00000515355 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.28
SUB1-213ENST00000515355 TRAF1Q13077 416 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 RUFY3Q7L099 469 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
SUB1-213ENST00000515355 C11orf49Q9H6J7 331 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
SUB1-213ENST00000515355 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 ASTN1O14525 1302 aa13.33□□□□□ -0.28
SUB1-213ENST00000515355 B4DLN1 442 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 EPB41L2O43491 1005 aaKnown RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 IGHA2P01877 340 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 ADCYAP1R1P41586 468 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
SUB1-213ENST00000515355 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
SUB1-213ENST00000515355 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.31□□□□□ -0.28
SUB1-213ENST00000515355 GCOM1H8Y6P7 765 aaPredicted RBP13.31□□□□□ -0.28
SUB1-213ENST00000515355 POLR2MP0CAP2 368 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 MYCLP12524 364 aaPredicted RBP13.31□□□□□ -0.28
SUB1-213ENST00000515355 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
SUB1-213ENST00000515355 TNFAIP2Q03169 654 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 STK3Q13188 491 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 SPC25Q9HBM1 224 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 COL20A1Q9P218 1284 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
SUB1-213ENST00000515355 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
SUB1-213ENST00000515355 SMCHD1A6NHR9 2005 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 BAZ2BQ9UIF8 2168 aaKnown RBP13.3□□□□□ -0.28
SUB1-213ENST00000515355 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
SUB1-213ENST00000515355 EVI5O60447 810 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
SUB1-213ENST00000515355 CAPN2P17655 700 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 PTGS1P23219 599 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 CDC27P30260 824 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 LRRC41Q15345 812 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 SEPT14Q6ZU15 432 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 RNF180Q86T96 592 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
SUB1-213ENST00000515355 NSUN6Q8TEA1 469 aaKnown RBP13.3□□□□□ -0.28
SUB1-213ENST00000515355 GPKOWQ92917 476 aaPredicted RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms