RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
SMAD5-209ENST00000514777 LPXNO60711 386 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 PLA2G6O60733 806 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 DUSP28Q4G0W2 176 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 RASGRP2Q7LDG7 609 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 IFNL3Q8IZI9 196 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 KBTBD3Q8NAB2 608 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 ARNTL2Q8WYA1 636 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 VTA1Q9NP79 307 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 CD320Q9NPF0 282 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 PRR12Q9ULL5 1215 aa15.57■□□□□ 0.08
SMAD5-209ENST00000514777 RBM47A0AV96 593 aaKnown RBP15.56■□□□□ 0.08
SMAD5-209ENST00000514777 RNF113AO15541 343 aaKnown RBP15.56■□□□□ 0.08
SMAD5-209ENST00000514777 IQCF3P0C7M6 154 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 SUPT20HL2P0C7V6 817 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 SLC1A4P43007 532 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 TDO2P48775 406 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 TFAP4Q01664 338 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 GRB10Q13322 594 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 RCSD1Q6JBY9 416 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 KCTD1Q719H9 257 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 PHOSPHO2Q8TCD6 241 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 SLC9A7Q96T83 725 aa15.56■□□□□ 0.08
SMAD5-209ENST00000514777 COL4A4P53420 1690 aaPredicted RBP15.56■□□□□ 0.08
SMAD5-209ENST00000514777 GPR37L1O60883 481 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 NBPF20Q3BBV1 942 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 TMEM31Q5JXX7 168 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 HERC6Q8IVU3 1022 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 HLA-CQ95604 372 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 WDR11Q9BZH6 1224 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 ZNF287Q9HBT7 754 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 IL17RBQ9NRM6 502 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 ECHDC1Q9NTX5 307 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 POLR3EQ9NVU0 708 aa15.55■□□□□ 0.08
SMAD5-209ENST00000514777 RBAK-RBAKDNI3L0D1 243 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 APPP05067 770 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 MYL3P08590 195 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 ACTN1P12814 892 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 GNAT2P19087 354 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 RFC2P35250 354 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 IKQ13123 557 aaPredicted RBP15.54■□□□□ 0.08
SMAD5-209ENST00000514777 BAATQ14032 418 aaPredicted RBP15.54■□□□□ 0.08
SMAD5-209ENST00000514777 GPNMBQ14956 572 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 NSMFQ6X4W1 530 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 SEC62Q99442 399 aaKnown RBP15.54■□□□□ 0.08
SMAD5-209ENST00000514777 MTG1Q9BT17 334 aaPredicted RBP15.54■□□□□ 0.08
SMAD5-209ENST00000514777 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 ISY1Q9ULR0 285 aaKnown RBP15.54■□□□□ 0.08
SMAD5-209ENST00000514777 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
SMAD5-209ENST00000514777 FAM86C2PA6NEL3 165 aa15.53■□□□□ 0.08
SMAD5-209ENST00000514777 PI4K2BG5E9Z4 385 aa15.53■□□□□ 0.08
SMAD5-209ENST00000514777 NMT2O60551 498 aa15.53■□□□□ 0.08
SMAD5-209ENST00000514777 ALDH5A1P51649 535 aaPredicted RBP15.53■□□□□ 0.08
SMAD5-209ENST00000514777 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMAD5-209ENST00000514777 TSHZ3Q63HK5 1081 aa15.53■□□□□ 0.08
SMAD5-209ENST00000514777 CCPG1Q9ULG6 757 aa15.53■□□□□ 0.08
SMAD5-209ENST00000514777 LCHNA4D1U4 455 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 ICAM1P05362 532 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 CPT1AP50416 773 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 PDE4BQ07343 736 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 NFRKBQ6P4R8 1299 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 TMCO2Q7Z6W1 182 aaPredicted RBP15.52■□□□□ 0.08
SMAD5-209ENST00000514777 OR6J1Q8NGC5 347 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 COPS5Q92905 334 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 CTAGE1Q96RT6 745 aa15.52■□□□□ 0.08
SMAD5-209ENST00000514777 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMAD5-209ENST00000514777 MUC6Q6W4X9 2439 aa15.52■□□□□ 0.07
SMAD5-209ENST00000514777 NFIBO00712 420 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 ZFYP08048 801 aaPredicted RBP15.51■□□□□ 0.07
SMAD5-209ENST00000514777 MS4A1P11836 297 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 NOVP48745 357 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 PPARAQ07869 468 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 RETREG2Q8NC44 543 aa15.51■□□□□ 0.07
SMAD5-209ENST00000514777 FTOQ9C0B1 505 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMAD5-209ENST00000514777 RANBP17Q9H2T7 1088 aaKnown RBP15.51■□□□□ 0.07
SMAD5-209ENST00000514777 A6NJR5 290 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 KIF28PB7ZC32 967 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 FOXP2O15409 715 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 SLC16A2P36021 539 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 PTPN11Q06124 597 aaPredicted RBP15.5■□□□□ 0.07
SMAD5-209ENST00000514777 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 CLEC4DQ8WXI8 215 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 GPHNQ9NQX3 736 aaPredicted RBP15.5■□□□□ 0.07
SMAD5-209ENST00000514777 ADD3Q9UEY8 706 aaKnown RBP15.5■□□□□ 0.07
SMAD5-209ENST00000514777 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 SIP14410 1827 aa15.5■□□□□ 0.07
SMAD5-209ENST00000514777 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.49■□□□□ 0.07
SMAD5-209ENST00000514777 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
SMAD5-209ENST00000514777 BAIAP3O94812 1187 aa15.49■□□□□ 0.07
SMAD5-209ENST00000514777 WDR5P61964 334 aaKnown RBP15.49■□□□□ 0.07
SMAD5-209ENST00000514777 CTDSPL2Q05D32 466 aa15.49■□□□□ 0.07
SMAD5-209ENST00000514777 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
SMAD5-209ENST00000514777 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms