RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SLC16A2P36021 539 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 NOVP48745 357 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 CPT1AP50416 773 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
DDX41-211ENST00000510171 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 VWCEQ96DN2 955 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
DDX41-211ENST00000510171 PLXNA1Q9UIW2 1896 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
DDX41-211ENST00000510171 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 ACTN1P12814 892 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
DDX41-211ENST00000510171 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
DDX41-211ENST00000510171 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 AAK1Q2M2I8 961 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 BRDTQ58F21 947 aaPredicted RBP12.29□□□□□ -0.44
DDX41-211ENST00000510171 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
DDX41-211ENST00000510171 ANAPC4Q9UJX5 808 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 PNMA2Q9UL42 364 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 TNKSO95271 1327 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
DDX41-211ENST00000510171 RBM47A0AV96 593 aaKnown RBP12.28□□□□□ -0.44
DDX41-211ENST00000510171 NFIBO00712 420 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 FOXP2O15409 715 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 ORC4O43929 436 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 KPNA6O60684 536 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
DDX41-211ENST00000510171 MX1P20591 662 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 CALML3P27482 149 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 RFC2P35250 354 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
DDX41-211ENST00000510171 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
DDX41-211ENST00000510171 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
DDX41-211ENST00000510171 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 MYH8P13535 1937 aa12.28□□□□□ -0.44
DDX41-211ENST00000510171 CDH23Q9H251 3354 aa12.27□□□□□ -0.44
DDX41-211ENST00000510171 NKRFO15226 690 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDX41-211ENST00000510171 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
DDX41-211ENST00000510171 CA3P07451 260 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 FGRP09769 529 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 IQCF3P0C7M6 154 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 BMP1P13497 986 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 PDE4DQ08499 809 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 ALX1Q15699 326 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
DDX41-211ENST00000510171 VPS53Q5VIR6 699 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 PHOSPHO2Q8TCD6 241 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 FTOQ9C0B1 505 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDX41-211ENST00000510171 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
DDX41-211ENST00000510171 RAD50Q92878 1312 aa12.27□□□□□ -0.45
DDX41-211ENST00000510171 A6NJR5 290 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 B4DLN1 442 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 RFXAPO00287 272 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 POU3F3P20264 500 aaPredicted RBP12.26□□□□□ -0.45
DDX41-211ENST00000510171 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
DDX41-211ENST00000510171 TFF2Q03403 129 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
DDX41-211ENST00000510171 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 SCFD2Q8WU76 684 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 EVI5LQ96CN4 794 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 NECAB3Q96P71 396 aaPredicted RBP12.26□□□□□ -0.45
DDX41-211ENST00000510171 SLC9A7Q96T83 725 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 CERS4Q9HA82 394 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
DDX41-211ENST00000510171 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
DDX41-211ENST00000510171 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 FGAP02671 866 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 TXNP10599 105 aaKnown RBP12.25□□□□□ -0.45
DDX41-211ENST00000510171 PDHBP11177 359 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 EDNRBP24530 442 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
DDX41-211ENST00000510171 BFSP2Q13515 415 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 DNERQ8NFT8 737 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 TTC14Q96N46 770 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 NOD1Q9Y239 953 aa12.25□□□□□ -0.45
DDX41-211ENST00000510171 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 TAP1Q03518 808 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 ZNF543Q08ER8 600 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms