RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 NFIBO00712 420 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 ADCY6O43306 1168 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 SMPD1P17405 629 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 FAAP100Q0VG06 881 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 USH1GQ495M9 461 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 BRDTQ58F21 947 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 C9orf50Q5SZB4 431 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 TTC22Q5TAA0 569 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 SLC17A8Q8NDX2 589 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 PURBQ96QR8 312 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 VAT1LQ9HCJ6 419 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 Q9Y3F1 56 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 MCM3APO60318 1980 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 GABBR2O75899 941 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 TIMP1P01033 207 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 CDK7P50613 346 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 IFIT1BQ5T764 474 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 SEZ6LQ9BYH1 1024 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 WDR11Q9BZH6 1224 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 TNKSO95271 1327 aa11.79□□□□□ -0.52
UBE2D3-227ENST00000508818 ITGB8P26012 769 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 PDE4AP27815 886 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 NKX3-2P78367 333 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 FAM109BQ6ICB4 259 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 SLC30A10Q6XR72 485 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 MCF2L2Q86YR7 1114 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 TMEM199Q8N511 208 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 MORC4Q8TE76 937 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 STXBP5LQ9Y2K9 1186 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 ASTN1O14525 1302 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 ABCB11O95342 1321 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 RAD50Q92878 1312 aa11.78□□□□□ -0.52
UBE2D3-227ENST00000508818 ERICH2A1L162 156 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 CTAGE5O15320 804 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 CPT1AP50416 773 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.535e-7■□□□□ 10
UBE2D3-227ENST00000508818 ITGA7Q13683 1181 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 MFSD5Q6N075 450 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 RALYLQ86SE5 291 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 ADGRF4Q8IZF3 695 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 OR6J1Q8NGC5 347 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 SCFD2Q8WU76 684 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 PPP1R12CQ9BZL4 782 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 MRPL11Q9Y3B7 192 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-227ENST00000508818 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 MYL3P08590 195 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 CHMLP26374 656 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 EPHB4P54760 987 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 NSUN6Q8TEA1 469 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 MAF1Q9H063 256 aa11.76□□□□□ -0.53
UBE2D3-227ENST00000508818 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 LTBP2Q14767 1821 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 IFIT3O14879 490 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 KPNA6O60684 536 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 TXNP10599 105 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 PTGS1P23219 599 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 PSMC6P62333 389 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 TRAF1Q13077 416 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 TTLL4Q14679 1199 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 TMEM63BQ5T3F8 832 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms