RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 ASIC2Q16515 512 aa16.19■□□□□ 0.18
ATP2C1-214ENST00000508532 MS4A14Q96JA4 679 aa16.19■□□□□ 0.18
ATP2C1-214ENST00000508532 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
ATP2C1-214ENST00000508532 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
ATP2C1-214ENST00000508532 SNX12Q9UMY4 172 aa16.19■□□□□ 0.18
ATP2C1-214ENST00000508532 MPHOSPH10O00566 681 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 OR52Z1P0C646 297 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 EIF3HO15372 352 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 NAA35Q5VZE5 725 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 ELOA2Q8IYF1 753 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 CCDC24Q8N4L8 307 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 PACSIN2Q9UNF0 486 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 RNF225M0QZC1 329 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 PLEKP08567 350 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 NT5DC1Q5TFE4 455 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 SMCO2A6NFE2 343 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 BACH1O14867 736 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 DAAM2Q86T65 1068 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 NCAPGQ9BPX3 1015 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
ATP2C1-214ENST00000508532 ACTN3Q08043 901 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 CACNA2D3Q8IZS8 1091 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 UHMK1Q8TAS1 419 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 FAM237AA0A1B0GTK4 181 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 FCER1AP12319 257 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 ADSSL1Q8N142 457 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 BAG3O95817 575 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 ARL8AQ96BM9 186 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 HERVK_113P62684 666 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 PCDHA4Q9UN74 947 aa16.17■□□□□ 0.18
ATP2C1-214ENST00000508532 MYO1FO00160 1098 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 RPSAP08865 295 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 TBC1D31Q96DN5 1066 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 GOLGA6L10A0A0M3HER8 536 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 TMEM110-MUSTN1A8MSY1 372 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 FOXP2O15409 715 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 SEC24CP53992 1094 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 PPP1R7Q15435 360 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 ANKRD40Q6AI12 368 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 PEX26Q7Z412 305 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 SRBD1Q8N5C6 995 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 ADAMTS1Q9UHI8 967 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 A0A1W2PQC6 194 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 KRIT1O00522 736 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 CALCRLQ16602 461 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 CCDC26Q8TAB7 109 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 HNRNPH1P31943 449 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 CACNA1FO60840 1977 aa16.16■□□□□ 0.18
ATP2C1-214ENST00000508532 CYP2D6P10635 497 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 ARL6IP4Q66PJ3 421 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 KRT25Q7Z3Z0 450 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 SPATS2Q86XZ4 545 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 SAMD15Q9P1V8 674 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 FAM208AQ9UK61 1670 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 SYF2O95926 243 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 MYBL2P10244 700 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 AP1M1Q9BXS5 423 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 PLAAQ9Y263 795 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 ZNF76P36508 570 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 MED15Q96RN5 788 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 KANSL2Q9H9L4 492 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 PALMO75781 387 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 VWA3BQ502W6 1294 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 CAPN6Q9Y6Q1 641 aa16.15■□□□□ 0.18
ATP2C1-214ENST00000508532 KLRF2D3W0D1 207 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 APBA1Q02410 837 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 PROCA1Q8NCQ7 364 aaPredicted RBP16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 LMBR1Q8WVP7 490 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 CARSP49589 748 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 ZIM3Q96PE6 472 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
ATP2C1-214ENST00000508532 SRGNP10124 158 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms