RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 ADCY7P51828 1080 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 LBX1P52954 281 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 IRF5Q13568 498 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 TRIM29Q14134 588 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 MORN1Q5T089 497 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 MSL3Q8N5Y2 521 aaKnown RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.52
HTT-204ENST00000508321 ZMYND12Q9H0C1 365 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 C6orf50Q9HD87 102 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 CYP39A1Q9NYL5 469 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 ADD3Q9UEY8 706 aaKnown RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 SRRDQ9UH36 339 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 DNAJC25-GNG10A0A024R161 153 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 B4DLN1 442 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 GCOM1H8Y6P7 765 aaPredicted RBP11.78□□□□□ -0.52
HTT-204ENST00000508321 OPLAHO14841 1288 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 PEX10O60683 326 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 POLR2MP0CAP2 368 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
HTT-204ENST00000508321 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
HTT-204ENST00000508321 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
HTT-204ENST00000508321 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 AP3B2Q13367 1082 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 MUM1L1Q5H9M0 696 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 NSMFQ6X4W1 530 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
HTT-204ENST00000508321 DAGLBQ8NCG7 672 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 DDX11Q96FC9 970 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 ABHD8Q96I13 439 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 PSTPIP2Q9H939 334 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 BRMS1Q9HCU9 246 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 RIC8AQ9NPQ8 531 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
HTT-204ENST00000508321 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 JAK2O60674 1132 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 FOSP01100 380 aaPredicted RBP11.77□□□□□ -0.53
HTT-204ENST00000508321 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
HTT-204ENST00000508321 FDPSP14324 419 aaKnown RBP11.77□□□□□ -0.53
HTT-204ENST00000508321 PDCP20941 246 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 CTGFP29279 349 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 PRKCZQ05513 592 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 OLFML2BQ68BL8 750 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 OTOP1Q7RTM1 612 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
HTT-204ENST00000508321 FAM133AQ8N9E0 248 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 USP6NLQ92738 828 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 VPS54Q9P1Q0 977 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 TRIM17Q9Y577 477 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 FRMPD4Q14CM0 1322 aa11.77□□□□□ -0.53
HTT-204ENST00000508321 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 CFBP00751 764 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 BAATQ14032 418 aaPredicted RBP11.76□□□□□ -0.53
HTT-204ENST00000508321 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 SLC30A10Q6XR72 485 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 DPP9Q86TI2 863 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
HTT-204ENST00000508321 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 C8orf76Q96K31 380 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 PHF20Q9BVI0 1012 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 GJD2Q9UKL4 321 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 SYNGAP1Q96PV0 1343 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 MCM3APO60318 1980 aa11.76□□□□□ -0.53
HTT-204ENST00000508321 ASB14A6NK59 587 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 MEIS2O14770 477 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 MMP1P03956 469 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
HTT-204ENST00000508321 GJB2P29033 226 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 FLT3LGP49771 235 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 NLRP5P59047 1200 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 SAFBQ15424 915 aaKnown RBP eCLIP11.75□□□□□ -0.53
HTT-204ENST00000508321 ZNF792Q3KQV3 632 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 MAMDC4Q6UXC1 1216 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 NSUN6Q8TEA1 469 aaKnown RBP11.75□□□□□ -0.53
HTT-204ENST00000508321 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 NRBP1Q9UHY1 535 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
HTT-204ENST00000508321 MYH7BA7E2Y1 1941 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 COBLO75128 1261 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 PPFIA3O75145 1194 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 STAM2O75886 525 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 HMGCRP04035 888 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 KRT2P35908 639 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
HTT-204ENST00000508321 ALDH5A1P51649 535 aaPredicted RBP11.74□□□□□ -0.53
HTT-204ENST00000508321 XRRA1Q6P2D8 792 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms