RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 MMP19Q99542 508 aa9.36□□□□□ -0.91
COL6A4P1-204ENST00000508169 CAAP1Q9H8G2 361 aa9.36□□□□□ -0.91
COL6A4P1-204ENST00000508169 GPR27Q9NS67 375 aa9.36□□□□□ -0.91
COL6A4P1-204ENST00000508169 TNPO3Q9Y5L0 923 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-204ENST00000508169 GSG1L2A8MUP6 293 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 ARNTLO00327 626 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 OPA1O60313 960 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 RASGRP1O95267 797 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 CRTAMO95727 393 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 ASLP04424 464 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 NAT1P18440 290 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 SOX5P35711 763 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 IGFALSP35858 605 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 GPR85P60893 370 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 ZPBP2Q6X784 338 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
COL6A4P1-204ENST00000508169 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 IKZF1Q13422 519 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 CT47A1Q5JQC4 288 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 RNF180Q86T96 592 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 MTDHQ86UE4 582 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 PPM1KQ8N3J5 372 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 ERVK13-1Q9NX77 482 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 PCDHA9Q9Y5H5 950 aa9.34□□□□□ -0.91
COL6A4P1-204ENST00000508169 TCRBV16S1A1N1A0A5B0 115 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 FURINP09958 794 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 LCP1P13796 627 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 GUCY1A3Q02108 690 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 LAPTM5Q13571 262 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 ZNF460Q14592 562 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 STK11IPQ8N1F8 1099 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 SEMA6BQ9H3T3 888 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 BSDC1Q9NW68 430 aaPredicted RBP9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 ZNF281Q9Y2X9 895 aa9.33□□□□□ -0.92
COL6A4P1-204ENST00000508169 MSCO60682 206 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 INF2Q27J81 1249 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 INTS5Q6P9B9 1019 aaKnown RBP9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 CPNE8Q86YQ8 564 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 AHI1Q8N157 1196 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 RCBTB1Q8NDN9 531 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 CARS2Q9HA77 564 aaKnown RBP9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 PCDHA8Q9Y5H6 950 aa9.32□□□□□ -0.92
COL6A4P1-204ENST00000508169 B4E1Z4 1266 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 POU3F2P20265 443 aaPredicted RBP9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 FLT3P36888 993 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 NEK4P51957 841 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 BNIP3Q12983 259 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 MBLAC2Q68D91 279 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 LBX2Q6XYB7 198 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 UBR7Q8N806 425 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
COL6A4P1-204ENST00000508169 FAM83GA6ND36 823 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 MYO1BO43795 1136 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 JMJD7P0C870 316 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 CD96P40200 585 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 TMEM52Q8NDY8 209 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 BCL7CQ8WUZ0 217 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 LMCD1Q9NZU5 365 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 SLC5A6Q9Y289 635 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 PCDHA2Q9Y5H9 948 aa9.3□□□□□ -0.92
COL6A4P1-204ENST00000508169 ARVCFO00192 962 aa9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 COBLO75128 1261 aa9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 KIZQ2M2Z5 673 aa9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 ANGEL2Q5VTE6 544 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 HLA-DQA1Q5Y7H0 255 aa9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 ZCCHC8Q6NZY4 707 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 UBE2R2Q712K3 238 aaPredicted RBP9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 RPUSD2Q8IZ73 545 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 TNFRSF10DQ9UBN6 386 aa9.29□□□□□ -0.92
COL6A4P1-204ENST00000508169 KPNA6O60684 536 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 NFKB2Q00653 900 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 DUSP4Q13115 394 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 PAK1Q13153 545 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 CFAP100Q494V2 611 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 ZC3H7AQ8IWR0 971 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 MAP6Q96JE9 813 aa9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 FAM126AQ9BYI3 521 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 TIMM13Q9Y5L4 95 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-204ENST00000508169 C7orf72A4D263 438 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 NPHS1O60500 1241 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 NPTXRO95502 500 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 CD8BP10966 210 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 POU3F3P20264 500 aaPredicted RBP9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 RPL11P62913 178 aaKnown RBP9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 ZP2Q05996 745 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 DDX53Q86TM3 631 aaKnown RBP9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 JAMLQ86YT9 394 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 G6PC3Q9BUM1 346 aa9.27□□□□□ -0.93
COL6A4P1-204ENST00000508169 SLAMF8Q9P0V8 285 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms