RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 CHST13Q8NET6 341 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 EFCC1Q9HA90 598 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 CFBP00751 764 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
RNF4-208ENST00000507247 GHRHRQ02643 423 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 RESTQ13127 1097 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNF4-208ENST00000507247 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
RNF4-208ENST00000507247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNF4-208ENST00000507247 SHCBP1Q8NEM2 672 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
RNF4-208ENST00000507247 PCDHA6Q9UN73 950 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 PCDHA8Q9Y5H6 950 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
RNF4-208ENST00000507247 FAM205CA6NFA0 338 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 TRPA1O75762 1119 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 F13A1P00488 732 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.196e-8■□□□□ 9.9
RNF4-208ENST00000507247 COPB2P35606 906 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 HSD17B4P51659 736 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 CCNA1P78396 465 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 NUCB2P80303 420 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 MAP2K1Q02750 393 aaPredicted RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 JAKMIP3Q5VZ66 844 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 NSMFQ6X4W1 530 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 REXO1Q8N1G1 1221 aaKnown RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 CFHR5Q9BXR6 569 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 BRMS1Q9HCU9 246 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
RNF4-208ENST00000507247 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
RNF4-208ENST00000507247 ZNF236Q9UL36 1845 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 GCOM1H8Y6P7 765 aaPredicted RBP16.25■□□□□ 0.19
RNF4-208ENST00000507247 POLR2MP0CAP2 368 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 RPS6P62753 249 aaKnown RBP16.25■□□□□ 0.19
RNF4-208ENST00000507247 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 MROH8Q9H579 483 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
RNF4-208ENST00000507247 TCHHQ07283 1943 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
RNF4-208ENST00000507247 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
RNF4-208ENST00000507247 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 NOSTRINQ8IVI9 506 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
RNF4-208ENST00000507247 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
RNF4-208ENST00000507247 CYP39A1Q9NYL5 469 aa16.24■□□□□ 0.19
RNF4-208ENST00000507247 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
RNF4-208ENST00000507247 CTGFP29279 349 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 MAPK4P31152 587 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 FAM173BQ6P4H8 233 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 PIK3AP1Q6ZUJ8 805 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 KRT25Q7Z3Z0 450 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 GPR142Q7Z601 462 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 MMP19Q99542 508 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 ANO3Q9BYT9 981 aa16.23■□□□□ 0.19
RNF4-208ENST00000507247 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
RNF4-208ENST00000507247 LRRC37A2A6NM11 1700 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 CCDC194A0A1B0GVG4 234 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 AP3B2Q13367 1082 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 TAAR1Q96RJ0 339 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 MAF1Q9H063 256 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
RNF4-208ENST00000507247 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
RNF4-208ENST00000507247 PFASO15067 1338 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 WNT7AO00755 349 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 EDIL3O43854 480 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 FCER1AP12319 257 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 PTPREP23469 700 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 CAP1Q01518 475 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 CNTN2Q02246 1040 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 KCTD2Q14681 263 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 NONOQ15233 471 aaKnown RBP eCLIP16.21■□□□□ 0.196e-7■■■□□ 19.2
RNF4-208ENST00000507247 INF2Q27J81 1249 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 PLEKHH3Q7Z736 793 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms