RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SCG2P13521 617 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 SMARCA1P28370 1054 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 MCM2P49736 904 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 CNTN2Q02246 1040 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 UBE2SQ16763 222 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 PFKFB3Q16875 520 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 CPLX2Q6PUV4 134 aaKnown RBP10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 USP17L6PQ6QN14 398 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 GPR142Q7Z601 462 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 PGBD1Q96JS3 809 aa10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
SCAMP1-202ENST00000506858 TNPO2O14787 897 aaKnown RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 ATP2A1O14983 1001 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 COBLO75128 1261 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 CFBP00751 764 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 FDX1P10109 184 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 CYP2B6P20813 491 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 CALML3P27482 149 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 OAZ1P54368 228 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 NAPAP54920 295 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 CCNA1P78396 465 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 CUL4AQ13619 759 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 SLC30A10Q6XR72 485 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 PLEKHH3Q7Z736 793 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 SMARCC2Q8TAQ2 1214 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 RASGRP4Q8TDF6 673 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 MMP19Q99542 508 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 ALG1Q9BT22 464 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 RNF26Q9BY78 433 aaPredicted RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 TMEM260Q9NX78 707 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 COL20A1Q9P218 1284 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 DEXIO95424 95 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 SLC25A27O95847 323 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 PTPREP23469 700 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 GJB2P29033 226 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 ADORA2AP29274 412 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 PRKCZQ05513 592 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 ANKRD35Q8N283 1001 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 NPLOC4Q8TAT6 608 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 ACAD9Q9H845 621 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 BARHL2Q9NY43 387 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 GJD2Q9UKL4 321 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 TRIM17Q9Y577 477 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 MYH6P13533 1939 aa10.18□□□□□ -0.78
SCAMP1-202ENST00000506858 A0A0G2JMZ2 1700 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 ABCB11O95342 1321 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 CDKL5O76039 1030 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 FCER1AP12319 257 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 MAPK4P31152 587 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 CTCFP49711 727 aaPredicted RBP10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 FLT3LGP49771 235 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 FCGRTP55899 365 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 UBXN2AP68543 259 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 CCL14Q16627 93 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 CHST13Q8NET6 341 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 TAAR1Q96RJ0 339 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 MROH8Q9H579 483 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 PSTPIP2Q9H939 334 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 CYP39A1Q9NYL5 469 aa10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 BIN2Q9UBW5 565 aaPredicted RBP10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 MRPL11Q9Y3B7 192 aaKnown RBP10.17□□□□□ -0.78
SCAMP1-202ENST00000506858 ASTN1O14525 1302 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 SNPHO15079 494 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 ELNP15502 786 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 NLRP5P59047 1200 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 KCTD2Q14681 263 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 KIF22Q14807 665 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 MORN1Q5T089 497 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 JAKMIP3Q5VZ66 844 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 OTOP1Q7RTM1 612 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 FAM184AQ8NB25 1140 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 SYTL5Q8TDW5 730 aaPredicted RBP10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 FGD4Q96M96 766 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 LLPHQ9BRT6 129 aaKnown RBP10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 FLRT1Q9NZU1 646 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
SCAMP1-202ENST00000506858 STK36Q9NRP7 1315 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 MEIS2O14770 477 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 MYCP01106 439 aaPredicted RBP10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 TRIM32Q13049 653 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 GRB14Q14449 540 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms