RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 NHSL1Q5SYE7 1610 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 TRAPPC3O43617 180 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 IPO7O95373 1038 aaKnown RBP19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 PECAM1P16284 738 aaPredicted RBP19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 KRT2P35908 639 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 ARMC9Q7Z3E5 817 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 IFT20Q8IY31 132 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 SEC16BQ96JE7 1060 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 PHF20Q9BVI0 1012 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 NUP58Q9BVL2 599 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 KDM4CQ9H3R0 1056 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 EPB41L4AQ9HCS5 686 aaPredicted RBP19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 GDF3Q9NR23 364 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 TRPC6Q9Y210 931 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 C15orf41Q9Y2V0 281 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 BUB1BO60566 1050 aaPredicted RBP19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 ATP2C1P98194 919 aaPredicted RBP19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 IFNL3Q8IZI9 196 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 TRIM58Q8NG06 486 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 PARD3BQ8TEW8 1205 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 SPAG5Q96R06 1193 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 THAP9Q9H5L6 903 aa19.76■□□□□ 0.75
POLR2J3-209ENST00000504157 TNS3Q68CZ2 1445 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CSF1RP07333 972 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 TCP1P17987 556 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 RIPK1Q13546 671 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CAPRIN2Q6IMN6 1127 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 STAMBPL1Q96FJ0 436 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 TACC3Q9Y6A5 838 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 DUSP10Q9Y6W6 482 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 COL22A1Q8NFW1 1626 aaPredicted RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 SMNDC1O75940 238 aaKnown RBP eCLIP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 DNM2P50570 870 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 MRPS25P82663 173 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 PAK2Q13177 524 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 BYSLQ13895 437 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 MIS18BP1Q6P0N0 1132 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CACNA2D3Q8IZS8 1091 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CCHCR1Q8TD31 782 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CCT6BQ92526 530 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 FAM210AQ96ND0 272 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 NAPBQ9H115 298 aa19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 ZNHIT6Q9NWK9 470 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-209ENST00000504157 CHD4Q14839 1912 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 SRGNP10124 158 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 MYO1EQ12965 1108 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 C8orf74Q6P047 294 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 MFSD6Q6ZSS7 791 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 SHISA4Q96DD7 197 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 MTRQ99707 1265 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 SLC12A6Q9UHW9 1150 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 MACROD2A1Z1Q3 448 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 FAM205CA6NFA0 338 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 PPIP5K2O43314 1243 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 AP1G2O75843 785 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 RPN1P04843 607 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 FAM153BP0C7A2 387 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 PEX19P40855 299 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 PRPHP41219 470 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 KIF5AQ12840 1032 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 QPCTQ16769 361 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 FAM153CQ494X1 144 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 MSL1Q68DK7 614 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 ZNF654Q8IZM8 581 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 ADSSL1Q8N142 457 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 CABLES1Q8TDN4 633 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 TNFRSF25Q93038 417 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 ACSBG1Q96GR2 724 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 OSBPL9Q96SU4 736 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 NHEJ1Q9H9Q4 299 aaPredicted RBP19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 TMBIM4Q9HC24 238 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 INCENPQ9NQS7 918 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 VPS54Q9P1Q0 977 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 CPSF2Q9P2I0 782 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 FAM153AQ9UHL3 310 aa19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 CORO1CQ9ULV4 474 aaPredicted RBP19.74■□□□□ 0.75
POLR2J3-209ENST00000504157 ALS2Q96Q42 1657 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 ERICH2A1L162 156 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 LIN7AO14910 233 aaPredicted RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 COBLO75128 1261 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 IDH1O75874 414 aaKnown RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 MATR3P43243 847 aaKnown RBP eCLIP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 ZBED6P86452 979 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 CTDSPL2Q05D32 466 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 TRIM28Q13263 835 aaKnown RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 TBC1D31Q96DN5 1066 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 THOC1Q96FV9 657 aaKnown RBP19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 BLZF1Q9H2G9 400 aa19.73■□□□□ 0.75
POLR2J3-209ENST00000504157 CYP27B1O15528 508 aa19.72■□□□□ 0.75
POLR2J3-209ENST00000504157 TACC1O75410 805 aa19.72■□□□□ 0.75
POLR2J3-209ENST00000504157 PRCPP42785 496 aa19.72■□□□□ 0.75
POLR2J3-209ENST00000504157 CARSP49589 748 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms