RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ABCB6Q9NP58 842 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 SNTG2Q9NY99 539 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 PKD2L1Q9P0L9 805 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 USP16Q9Y5T5 823 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 GJA3Q9Y6H8 435 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 A0A1W2PNR3 127 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 E7EWF7 191 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 J3QL48 77 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 MARCH6O60337 910 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 CMA1P23946 247 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 CTSOP43234 321 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 RASA3Q14644 834 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 BRAPQ7Z569 592 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 ZNF598Q86UK7 904 aaKnown RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 TMEM139Q8IV31 216 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 REXO1L1PQ8IX06 675 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 MB21D2Q8IYB1 491 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 KRT222Q8N1A0 295 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 LINC00528Q8N1L1 170 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 PLBD2Q8NHP8 589 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 DDX54Q8TDD1 881 aaKnown RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 MRPS27Q92552 414 aaKnown RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 ZNF512BQ96KM6 892 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 DEPDC7Q96QD5 511 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 LIN7BQ9HAP6 207 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 PRDM10Q9NQV6 1147 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 KANSL3Q9P2N6 904 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 ZNF215Q9UL58 517 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 AKAP2Q9Y2D5 859 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 FHOD1Q9Y613 1164 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 TMEM238LA0A1B0GVL6 79 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 TTC24A2A3L6 582 aaPredicted RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 GOLGA6L4A6NEF3 574 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 TULP2O00295 520 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 RNF113AO15541 343 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 PPP6R2O75170 966 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 FBXO24O75426 580 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 UPP2O95045 317 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 HSPD1P10809 573 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 PHKG2P15735 406 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 MSX1P28360 303 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 C1orf141Q5JVX7 400 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PCNX4Q63HM2 1172 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PRICKLE2Q7Z3G6 844 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 CEP57L1Q8IYX8 460 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PHC3Q8NDX5 983 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 RNF217Q8TC41 542 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 BICD2Q8TD16 824 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 KCNG4Q8TDN1 519 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 XAGE3Q8WTP9 111 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PPP1R13BQ96KQ4 1090 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 RNPC3Q96LT9 517 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 DBNDD2Q9BQY9 259 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PLA2G12BQ9BX93 195 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 NAT10Q9H0A0 1025 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 METTL14Q9HCE5 456 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 BRD7Q9NPI1 651 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PRKAG3Q9UGI9 489 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 UBR3Q6ZT12 1888 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 KCPQ6ZWJ8 1503 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 TIAM2Q8IVF5 1701 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PHF20L1A8MW92 1017 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 IL2RBP14784 551 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 EVA1CP58658 441 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SLC20A2Q08357 652 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 PTPAQ15257 358 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 DDB1Q16531 1140 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 CT47A1Q5JQC4 288 aaPredicted RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 NT5DC1Q5TFE4 455 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 FBXO38Q6PIJ6 1188 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 ANAPC16Q96DE5 110 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 C16orf45Q96MC5 204 aaPredicted RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 TCEANC2Q96MN5 208 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SEC62Q99442 399 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 MAP3K14Q99558 947 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SRRTQ9BXP5 876 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 ZFYVE1Q9HBF4 777 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 TIMMDC1Q9NPL8 285 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 ECM29Q5VYK3 1845 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 MEGF6O75095 1541 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 GOLGA6L19H0YKK7 550 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 CCP110O43303 1012 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 GREM1O60565 184 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SNRPA1P09661 255 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 IL15P40933 162 aaPredicted RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 KCNJ4P48050 445 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SARSP49591 514 aaKnown RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 LIG3P49916 1009 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 APOBRQ0VD83 1088 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SLC39A14Q15043 492 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SNAP47Q5SQN1 464 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 CCDC129Q6ZRS4 1044 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 COPS6Q7L5N1 327 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 LYSMD3Q7Z3D4 306 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 FILIP1Q7Z7B0 1213 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 FSIP1Q8NA03 581 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 FBXO18Q8NFZ0 1043 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 SLC16A10Q8TF71 515 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 DDX11Q96FC9 970 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms