RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 KRT2P35908 639 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 LACTBP83111 547 aaPredicted RBP22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 KCTD2Q14681 263 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 MUM1L1Q5H9M0 696 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 RNF207Q6ZRF8 634 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 PLEKHH3Q7Z736 793 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 ZSCAN16Q9H4T2 348 aaPredicted RBP22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 A1CFQ9NQ94 594 aaKnown RBP22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 CYP39A1Q9NYL5 469 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 IVNS1ABPQ9Y6Y0 642 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 ZNF236Q9UL36 1845 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 NFIBO00712 420 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 HOXC6P09630 235 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 GRB14Q14449 540 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 KIF22Q14807 665 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 KRT25Q7Z3Z0 450 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 GPR142Q7Z601 462 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 SOCS4Q8WXH5 440 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 EHMT1Q9H9B1 1298 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 SLC5A4Q9NY91 659 aa22.62■■□□□ 1.21
SCAMP3-209ENST00000497470 FRMPD4Q14CM0 1322 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 SMCHD1A6NHR9 2005 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 TBC1D8O95759 1140 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 FCGRTP55899 365 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 RPS6P62753 249 aaKnown RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 XRRA1Q6P2D8 792 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 BRAPQ7Z569 592 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 ZNF467Q7Z7K2 595 aaPredicted RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 DIS3L2Q8IYB7 885 aaKnown RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 ANKRD35Q8N283 1001 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 MSL3Q8N5Y2 521 aaKnown RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 SYTL5Q8TDW5 730 aaPredicted RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 TNFRSF25Q93038 417 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 ADD3Q9UEY8 706 aaKnown RBP22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 MTMR6Q9Y217 621 aa22.61■■□□□ 1.21
SCAMP3-209ENST00000497470 B4DLN1 442 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 CFBP00751 764 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 PRMT2P55345 433 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 IRF5Q13568 498 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 MORN1Q5T089 497 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 FAM133AQ8N9E0 248 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 ERO1AQ96HE7 468 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 MMP19Q99542 508 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 KCNJ14Q9UNX9 436 aa22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 RBBP6Q7Z6E9 1792 aaKnown RBP22.6■■□□□ 1.21
SCAMP3-209ENST00000497470 FKTNO75072 461 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 BRD1O95696 1058 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 HOXD10P28358 340 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 TRAPPC10P48553 1259 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 USP6NLQ92738 828 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 IWS1Q96ST2 819 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 HOMER2Q9NSB8 354 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 FOXD4L1Q9NU39 408 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 PCDHA6Q9UN73 950 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 PCDHA8Q9Y5H6 950 aa22.59■■□□□ 1.21
SCAMP3-209ENST00000497470 SPDYE3A6NKU9 549 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 ZSCAN22P10073 491 aaPredicted RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 XRCC5P13010 732 aaKnown RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 SLC4A3P48751 1232 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 USP11P51784 963 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 ORC2Q13416 577 aaPredicted RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 BAATQ14032 418 aaPredicted RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 NSMFQ6X4W1 530 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 NOSTRINQ8IVI9 506 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 CRYGNQ8WXF5 182 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 MPHOSPH6Q99547 160 aaKnown RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 NAP1L4Q99733 375 aaKnown RBP22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 GJB4Q9NTQ9 266 aa22.58■■□□□ 1.21
SCAMP3-209ENST00000497470 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 BTBD18B2RXH4 712 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 POTEB2H3BUK9 544 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 STAM2O75886 525 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 CYP3A4P08684 503 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 ZNF792Q3KQV3 632 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 ATL3Q6DD88 541 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 USP17L6PQ6QN14 398 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 MOXD1Q6UVY6 613 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 MORC4Q8TE76 937 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 NSUN6Q8TEA1 469 aaKnown RBP22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 NUDT12Q9BQG2 462 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 GJD2Q9UKL4 321 aa22.57■■□□□ 1.2
SCAMP3-209ENST00000497470 TNPO2O14787 897 aaKnown RBP22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 PEX10O60683 326 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 SREBF1P36956 1147 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 PSMC4P43686 418 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 MAP2K5Q13163 448 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 NONOQ15233 471 aaKnown RBP eCLIP22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 TBC1D5Q92609 795 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 ATP6V1DQ9Y5K8 247 aa22.56■■□□□ 1.2
SCAMP3-209ENST00000497470 CCDC194A0A1B0GVG4 234 aa22.55■■□□□ 1.2
SCAMP3-209ENST00000497470 ADORA2AP29274 412 aa22.55■■□□□ 1.2
SCAMP3-209ENST00000497470 MAMDC4Q6UXC1 1216 aa22.55■■□□□ 1.2
SCAMP3-209ENST00000497470 SPRYD3Q8NCJ5 442 aa22.55■■□□□ 1.2
SCAMP3-209ENST00000497470 ANO3Q9BYT9 981 aa22.55■■□□□ 1.2
SCAMP3-209ENST00000497470 VPS37CA5D8V6 355 aaPredicted RBP22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 ASB14A6NK59 587 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms