RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 CUL5Q93034 780 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 WNT2BQ93097 391 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 GSDMAQ96QA5 445 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 LRRC27Q9C0I9 530 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 RIOX1Q9H6W3 641 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 DDX4Q9NQI0 724 aaKnown RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 NYAP2Q9P242 653 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 WDR81Q562E7 1941 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 ATRNL1Q5VV63 1379 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 PARP14Q460N5 1801 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 FRMPD2Q68DX3 1309 aaPredicted RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 SYNRGQ9UMZ2 1314 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 IGKV6D-41A0A0C4DH26 115 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PNMA6FA0A0J9YX94 578 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 C21orf2O43822 256 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 RAD21O60216 631 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 MARCH6O60337 910 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 CCNT1O60563 726 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 GOLGA8HP0CJ92 632 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 SNHG28P0DPA3 235 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 GCFC2P16383 781 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 ERCC5P28715 1186 aaPredicted RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 SHMT1P34896 483 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 SLC1A4P43007 532 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 MRPL12P52815 198 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 TGFB2P61812 414 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 AMPD3Q01432 767 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 SPAG1Q07617 926 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 ZNF543Q08ER8 600 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 IKQ13123 557 aaPredicted RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 DLGAP5Q15398 846 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 ABCB5Q2M3G0 1257 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 LONRF3Q496Y0 759 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 FILIP1LQ4L180 1135 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 NT5DC1Q5TFE4 455 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 APOBEC3HQ6NTF7 200 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 USP17L2Q6R6M4 530 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
USP39-219ENST00000496047 TEX2Q8IWB9 1127 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 CALML4Q96GE6 196 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 CDK5RAP3Q96JB5 506 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PIGSQ96S52 555 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 EHMT1Q9H9B1 1298 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 VAT1LQ9HCJ6 419 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 GPCPD1Q9NPB8 672 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PCDHA6Q9UN73 950 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PCDHA8Q9Y5H6 950 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 PCDHA5Q9Y5H7 936 aa7.82□□□□□ -1.16
USP39-219ENST00000496047 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 ZBTB5O15062 677 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
USP39-219ENST00000496047 GRIN3BO60391 1043 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 TPM2P07951 284 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 TPM1P09493 284 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
USP39-219ENST00000496047 TCP10Q12799 353 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 TNFAIP1Q13829 316 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 NPY5RQ15761 445 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 INF2Q27J81 1249 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 LETM2Q2VYF4 491 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 SPECC1Q5M775 1068 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 RRAGBQ5VZM2 374 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 CCDC112Q8NEF3 446 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 AGBL3Q8NEM8 1001 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 JDP2Q8WYK2 163 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 CTAGE1Q96RT6 745 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 MXD3Q9BW11 206 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 PIM2Q9P1W9 311 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 MAN1B1Q9UKM7 699 aa7.81□□□□□ -1.16
USP39-219ENST00000496047 KDM3AQ9Y4C1 1321 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 KIF2AO00139 706 aaPredicted RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 SLC26A4O43511 780 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 CYTH3O43739 400 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 OFD1O75665 1012 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 PTGS1P23219 599 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 SFPQP23246 707 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP39-219ENST00000496047 AFMP43652 599 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 TERF1P54274 439 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 UBASH3AP57075 661 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 FANCCQ00597 558 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 AP3B2Q13367 1082 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 MORC3Q14149 939 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 TNIP1Q15025 636 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 CALCRLQ16602 461 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 FKBP1CQ5VVH2 108 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 SLFN13Q68D06 897 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 CCDC186Q7Z3E2 898 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 TMC6Q7Z403 805 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 GMCL1P1Q8NEA9 526 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 C7orf43Q8WVR3 580 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms