RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CCPG1Q9ULG6 757 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 PRR12Q9ULL5 1215 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
NUP50-218ENST00000493456 TNKSO95271 1327 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 ICAM1P05362 532 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 RFC2P35250 354 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 TFF2Q03403 129 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 TTLL4Q14679 1199 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 SKIV2LQ15477 1246 aaKnown RBP20.93■□□□□ 0.94
NUP50-218ENST00000493456 TSHZ3Q63HK5 1081 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 SLC9A7Q96T83 725 aa20.93■□□□□ 0.94
NUP50-218ENST00000493456 TRMT13Q9NUP7 481 aaKnown RBP20.93■□□□□ 0.94
NUP50-218ENST00000493456 LCTP09848 1927 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 TSPY2A6NKD2 308 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 CA3P07451 260 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 PURAQ00577 322 aaKnown RBP20.92■□□□□ 0.94
NUP50-218ENST00000493456 TMEM63BQ5T3F8 832 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 PHOSPHO2Q8TCD6 241 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 NECAB3Q96P71 396 aaPredicted RBP20.92■□□□□ 0.94
NUP50-218ENST00000493456 MTCH2Q9Y6C9 303 aa20.92■□□□□ 0.94
NUP50-218ENST00000493456 PITPNM1O00562 1244 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 CYP2C9P11712 490 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 ALDH5A1P51649 535 aaPredicted RBP20.91■□□□□ 0.94
NUP50-218ENST00000493456 SNAP25P60880 206 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 BRDTQ58F21 947 aaPredicted RBP20.91■□□□□ 0.94
NUP50-218ENST00000493456 RAD50Q92878 1312 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 MTG1Q9BT17 334 aaPredicted RBP20.91■□□□□ 0.94
NUP50-218ENST00000493456 WDR11Q9BZH6 1224 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 RANBP17Q9H2T7 1088 aaKnown RBP20.91■□□□□ 0.94
NUP50-218ENST00000493456 GPHNQ9NQX3 736 aaPredicted RBP20.91■□□□□ 0.94
NUP50-218ENST00000493456 COG5Q9UP83 839 aa20.91■□□□□ 0.94
NUP50-218ENST00000493456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
NUP50-218ENST00000493456 RBM47A0AV96 593 aaKnown RBP20.9■□□□□ 0.94
NUP50-218ENST00000493456 KCNQ1P51787 676 aa20.9■□□□□ 0.94
NUP50-218ENST00000493456 DEFB128Q7Z7B8 93 aa20.9■□□□□ 0.94
NUP50-218ENST00000493456 DCAF4Q8WV16 495 aa20.9■□□□□ 0.94
NUP50-218ENST00000493456 CHMP4CQ96CF2 233 aa20.9■□□□□ 0.94
NUP50-218ENST00000493456 SEC62Q99442 399 aaKnown RBP20.9■□□□□ 0.94
NUP50-218ENST00000493456 TTC41PQ6P2S7 1318 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 NKRFO15226 690 aaKnown RBP eCLIP20.89■□□□□ 0.93
NUP50-218ENST00000493456 MYL3P08590 195 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 BAATQ14032 418 aaPredicted RBP20.89■□□□□ 0.93
NUP50-218ENST00000493456 CCDC96Q2M329 555 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 NFRKBQ6P4R8 1299 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 PURBQ96QR8 312 aaKnown RBP20.89■□□□□ 0.93
NUP50-218ENST00000493456 DCTPP1Q9H773 170 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 IL17RBQ9NRM6 502 aa20.89■□□□□ 0.93
NUP50-218ENST00000493456 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
NUP50-218ENST00000493456 TANC1Q9C0D5 1861 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 KIF28PB7ZC32 967 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 KPNA6O60684 536 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 NOVP48745 357 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 ZMYM1Q5SVZ6 1142 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 RASGRP2Q7LDG7 609 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 MPHOSPH6Q99547 160 aaKnown RBP20.88■□□□□ 0.93
NUP50-218ENST00000493456 PNMA2Q9UL42 364 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 SCN10AQ9Y5Y9 1956 aa20.88■□□□□ 0.93
NUP50-218ENST00000493456 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 RFXAPO00287 272 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 PTPN11Q06124 597 aaPredicted RBP20.87■□□□□ 0.93
NUP50-218ENST00000493456 BFSP2Q13515 415 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 PPP2R5BQ15173 497 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 NBPF20Q3BBV1 942 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 FAM47CQ5HY64 1035 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 BTNL9Q6UXG8 535 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 RETREG2Q8NC44 543 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 FSD1Q9BTV5 496 aa20.87■□□□□ 0.93
NUP50-218ENST00000493456 ARIH1Q9Y4X5 557 aaPredicted RBP20.87■□□□□ 0.93
NUP50-218ENST00000493456 PRRC2BQ5JSZ5 2229 aaKnown RBP20.86■□□□□ 0.93
NUP50-218ENST00000493456 NFIBO00712 420 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 NMT2O60551 498 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 BAIAP3O94812 1187 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 IQCF3P0C7M6 154 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 TAP1Q03518 808 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 HERC6Q8IVU3 1022 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 CERS4Q9HA82 394 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 MTMR7Q9Y216 660 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 SCN5AQ14524 2016 aa20.86■□□□□ 0.93
NUP50-218ENST00000493456 EPOPA6NHQ4 379 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 RANBP6O60518 1105 aaKnown RBP20.85■□□□□ 0.93
NUP50-218ENST00000493456 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 SCFD2Q8WU76 684 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 ARNTL2Q8WYA1 636 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 FTOQ9C0B1 505 aaKnown RBP eCLIP20.85■□□□□ 0.93
NUP50-218ENST00000493456 ANAPC4Q9UJX5 808 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 HCN4Q9Y3Q4 1203 aa20.85■□□□□ 0.93
NUP50-218ENST00000493456 A6NJR5 290 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 EDNRBP24530 442 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 CTDSPL2Q05D32 466 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 PDE4DQ08499 809 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 SLC30A10Q6XR72 485 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 DNERQ8NFT8 737 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 PI4K2BQ8TCG2 481 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 HLA-CQ95604 372 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 NOD1Q9Y239 953 aa20.84■□□□□ 0.93
NUP50-218ENST00000493456 FOXP2O15409 715 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 ORC4O43929 436 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 CALML3P27482 149 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms