RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 TRIM17Q9Y577 477 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 EP400Q96L91 3159 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 HOXD10P28358 340 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 HERVK_113P62684 666 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 PTGDRQ13258 359 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 LRCH2Q5VUJ6 765 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 TCERG1LQ5VWI1 586 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 KRI1Q8N9T8 703 aaKnown RBP5.04□□□□□ -1.6
TRA2B-215ENST00000492417 ZNF784Q8NCA9 323 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-215ENST00000492417 ZNF668Q96K58 619 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-215ENST00000492417 GMLQ99445 158 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 EHD4Q9H223 541 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 TSPY26PQ9H489 355 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 JMJD4Q9H9V9 463 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 DACT1Q9NYF0 836 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 MAPK8IP1Q9UQF2 711 aa5.04□□□□□ -1.6
TRA2B-215ENST00000492417 TAF1P21675 1872 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MEIS1O00470 390 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 CAPN15O75808 1086 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 SMC2O95347 1197 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 BMP15O95972 392 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 PRELPP51888 382 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 SGMS1Q86VZ5 419 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 RNF169Q8NCN4 708 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 TBC1D5Q92609 795 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 GJA10Q969M2 543 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 TSPYL1Q9H0U9 437 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 CALCOCO1Q9P1Z2 691 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 FBXO40Q9UH90 709 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 ARHGEF35A5YM69 484 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 FAM205CA6NFA0 338 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MANSC4A6NHS7 340 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 FAM13AO94988 1023 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 FOSP01100 380 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 CLCN1P35523 988 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 PPATQ06203 517 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 TROAPQ12815 778 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 NOGQ13253 232 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 SKIDA1Q1XH10 827 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 TICAM2Q86XR7 235 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MRPS27Q92552 414 aaKnown RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 RUFY1Q96T51 708 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MAGEC2Q9UBF1 373 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MTMR6Q9Y217 621 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 CLIC4Q9Y696 253 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 CXCL11O14625 94 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 POLR2DO15514 142 aaKnown RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 DYNC1LI2O43237 492 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MYL3P08590 195 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 PSMC4P43686 418 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 MMP14P50281 582 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 RPS6P62753 249 aaKnown RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 AMPD3Q01432 767 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 STXBP2Q15833 593 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 PFKFB3Q16875 520 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 XKR9Q5GH70 373 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 NSUN6Q8TEA1 469 aaKnown RBP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 NUDT12Q9BQG2 462 aa5.03□□□□□ -1.6
TRA2B-215ENST00000492417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
TRA2B-215ENST00000492417 KIAA0100Q14667 2235 aaKnown RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 NFIBO00712 420 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 IGSF3O75054 1194 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 C6orf222P0C671 652 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 CCND2P30279 289 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 STX17P56962 302 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 CACNB1Q02641 598 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 MAP3K11Q16584 847 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 SLC30A10Q6XR72 485 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 TMEM87AQ8NBN3 555 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 SPC24Q8NBT2 197 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 SMARCE1Q969G3 411 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 WNK4Q96J92 1243 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 TTC12Q9H892 705 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 ARFGEF2Q9Y6D5 1785 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 MMP1P03956 469 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 USP8P40818 1118 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 ENOX2Q16206 610 aaKnown RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 MFSD14CQ5VZR4 134 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 PURBQ96QR8 312 aaKnown RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 TAAR1Q96RJ0 339 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 TEKT3Q9BXF9 490 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 NAT10Q9H0A0 1025 aaKnown RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 KIAA1683Q9H0B3 1180 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 FAM49AQ9H0Q0 323 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 BLZF1Q9H2G9 400 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 DNAJC18Q9H819 358 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 EXOC1Q9NV70 894 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 MAD2L2Q9UI95 211 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 PPP1R9AQ9ULJ8 1098 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 COL1A1P02452 1464 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-215ENST00000492417 MYO9BQ13459 2157 aa5.02□□□□□ -1.61
TRA2B-215ENST00000492417 OFD1O75665 1012 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms