RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MAP2K1Q02750 393 aaPredicted RBP21.35■■□□□ 1.01
MCF2L-230ENST00000491028 AP3B2Q13367 1082 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 CCAR1Q8IX12 1150 aaKnown RBP21.35■■□□□ 1.01
MCF2L-230ENST00000491028 PFASO15067 1338 aa21.34■■□□□ 1.01
MCF2L-230ENST00000491028 U2AF2P26368 475 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■□□□ 11.9
MCF2L-230ENST00000491028 GNL2Q13823 731 aaKnown RBP21.34■■□□□ 1.01
MCF2L-230ENST00000491028 PKP1Q13835 747 aa21.34■■□□□ 1.01
MCF2L-230ENST00000491028 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
MCF2L-230ENST00000491028 RNF207Q6ZRF8 634 aa21.34■■□□□ 1.01
MCF2L-230ENST00000491028 PORCNQ9H237 461 aa21.34■■□□□ 1.01
MCF2L-230ENST00000491028 ZSCAN16Q9H4T2 348 aaPredicted RBP21.34■■□□□ 1.01
MCF2L-230ENST00000491028 BTBD18B2RXH4 712 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 TRPA1O75762 1119 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 FOSP01100 380 aaPredicted RBP21.33■■□□□ 1.01
MCF2L-230ENST00000491028 NSMFQ6X4W1 530 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 KRT25Q7Z3Z0 450 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 OXER1Q8TDS5 423 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 TNFRSF25Q93038 417 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 EFCC1Q9HA90 598 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 A1CFQ9NQ94 594 aaKnown RBP21.33■■□□□ 1.01
MCF2L-230ENST00000491028 PCDHA6Q9UN73 950 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 PCDHA8Q9Y5H6 950 aa21.33■■□□□ 1.01
MCF2L-230ENST00000491028 MGAMO43451 1857 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 MYH15Q9Y2K3 1946 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 TBC1D8O95759 1140 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 F13A1P00488 732 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 RPS6P62753 249 aaKnown RBP21.32■■□□□ 1
MCF2L-230ENST00000491028 RESTQ13127 1097 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 NR5A1Q13285 461 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 KCTD2Q14681 263 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 UBE2SQ16763 222 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 USP17L6PQ6QN14 398 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 SLC30A10Q6XR72 485 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 BRAPQ7Z569 592 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 NOSTRINQ8IVI9 506 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 ABRAQ8N0Z2 381 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 ANKRD35Q8N283 1001 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 CYP39A1Q9NYL5 469 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 BIN2Q9UBW5 565 aaPredicted RBP21.32■■□□□ 1
MCF2L-230ENST00000491028 IVNS1ABPQ9Y6Y0 642 aa21.32■■□□□ 1
MCF2L-230ENST00000491028 SPDYE3A6NKU9 549 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 KIF28PB7ZC32 967 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 STRNO43815 780 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 FCER1AP12319 257 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 BAATQ14032 418 aaPredicted RBP21.31■■□□□ 1
MCF2L-230ENST00000491028 WDR78Q5VTH9 848 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 TBC1D5Q92609 795 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 MMP19Q99542 508 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 BEGAINQ9BUH8 593 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 EHMT1Q9H9B1 1298 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 LCTP09848 1927 aa21.31■■□□□ 1
MCF2L-230ENST00000491028 CCDC194A0A1B0GVG4 234 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 ADAMTS3O15072 1205 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 HOXA13P31271 388 aaPredicted RBP21.3■■□□□ 1
MCF2L-230ENST00000491028 NOM1Q5C9Z4 860 aaKnown RBP21.3■■□□□ 1
MCF2L-230ENST00000491028 JAKMIP3Q5VZ66 844 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 GPR142Q7Z601 462 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 FERMT3Q86UX7 667 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 RASGRP4Q8TDF6 673 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 SYTL5Q8TDW5 730 aaPredicted RBP21.3■■□□□ 1
MCF2L-230ENST00000491028 ANO3Q9BYT9 981 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 R3HDMLQ9H3Y0 253 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 TMEM260Q9NX78 707 aa21.3■■□□□ 1
MCF2L-230ENST00000491028 NONOQ15233 471 aaKnown RBP eCLIP21.29■■□□□ 1
MCF2L-230ENST00000491028 ZNFX1Q9P2E3 1918 aaKnown RBP21.29■■□□□ 1
MCF2L-230ENST00000491028 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
MCF2L-230ENST00000491028 PTPREP23469 700 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 SP3Q02447 781 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 GRB14Q14449 540 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 FCHSD1Q86WN1 690 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 JMYQ8N9B5 988 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 PLXNA1Q9UIW2 1896 aa21.28■■□□□ 1
MCF2L-230ENST00000491028 DNAJC25-GNG10A0A024R161 153 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 SLC15A5A6NIM6 579 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 POTEB2H3BUK9 544 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 LACTBP83111 547 aaPredicted RBP21.27■■□□□ 1
MCF2L-230ENST00000491028 FOXD4L5Q5VV16 416 aaPredicted RBP21.27■■□□□ 1
MCF2L-230ENST00000491028 PIK3AP1Q6ZUJ8 805 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 FOXD4L4Q8WXT5 416 aaPredicted RBP21.27■■□□□ 1
MCF2L-230ENST00000491028 WBP1LQ9NX94 342 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 COL20A1Q9P218 1284 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
MCF2L-230ENST00000491028 MYH7BA7E2Y1 1941 aa21.27■■□□□ 1
MCF2L-230ENST00000491028 RPTORQ8N122 1335 aa21.27■□□□□ 0.99
MCF2L-230ENST00000491028 GPR25O00155 361 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 SREBF1P36956 1147 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 TRAPPC10P48553 1259 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 FCGRTP55899 365 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 KIF22Q14807 665 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 EARS2Q5JPH6 523 aaKnown RBP21.26■□□□□ 0.99
MCF2L-230ENST00000491028 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 FAM133AQ8N9E0 248 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 DNERQ8NFT8 737 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 PGBD1Q96JS3 809 aa21.26■□□□□ 0.99
MCF2L-230ENST00000491028 ADD3Q9UEY8 706 aaKnown RBP21.26■□□□□ 0.99
MCF2L-230ENST00000491028 LOC102724159A0A0B4J2E5 919 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 TNPO2O14787 897 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms