RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
HDAC9-225ENST00000490851 AFMP43652 599 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 C4orf32Q8N8J7 132 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 RASSF8Q8NHQ8 419 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 TIGD1Q96MW7 591 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 UIMC1Q96RL1 719 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 RIC8AQ9NPQ8 531 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 GPRC5DQ9NZD1 345 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 AP5Z1O43299 807 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 ADCY5O95622 1261 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 ASNSP08243 561 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 CASP1P29466 404 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 INPP5BP32019 993 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 STAT2P52630 851 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PRKG1Q13976 671 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 UVSSAQ2YD98 709 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 STAMQ92783 540 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PPP1R9BQ96SB3 815 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PLIN2Q99541 437 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 CCDC94Q9BW85 323 aaPredicted RBP11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PHF20L1A8MW92 1017 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 NEMFO60524 1076 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 TDP2O95551 362 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 YBX3P16989 372 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC9-225ENST00000490851 MRPL12P52815 198 aaKnown RBP11.4□□□□□ -0.58
HDAC9-225ENST00000490851 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 POTEDQ86YR6 584 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 GPC2Q8N158 579 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 FBXO28Q9NVF7 368 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 BECN2A8MW95 431 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
HDAC9-225ENST00000490851 POSTNQ15063 836 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 DLK2Q6UY11 383 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 MYCBPQ99417 103 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-225ENST00000490851 AMNQ9BXJ7 453 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 PCDHA5Q9Y5H7 936 aa11.4□□□□□ -0.58
HDAC9-225ENST00000490851 GOLGA6L19H0YKK7 550 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 SLC37A4O43826 429 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 KARSQ15046 597 aaKnown RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 OR52Z1P0C646 297 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 NLRP12P59046 1061 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 ARL6IP4Q66PJ3 421 aaKnown RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 GJA10Q969M2 543 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 PDLIM2Q96JY6 352 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 FEZ2Q9UHY8 353 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
HDAC9-225ENST00000490851 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
HDAC9-225ENST00000490851 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 LONP1P36776 959 aaKnown RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 TECP42680 631 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 TXKP42681 527 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 IQCB1Q15051 598 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 ITFG2Q969R8 447 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 TXLNAP40222 546 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 CALCRLQ16602 461 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 APOBEC3FQ8IUX4 373 aaKnown RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 NME8Q8N427 588 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 SMARCE1Q969G3 411 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 NAT10Q9H0A0 1025 aaKnown RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 BLZF1Q9H2G9 400 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 TUBE1Q9UJT0 475 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 MORC2Q9Y6X9 1032 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-225ENST00000490851 SBF1O95248 1867 aa11.38□□□□□ -0.59
HDAC9-225ENST00000490851 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 UBA7P41226 1012 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 CLK2P49760 499 aaKnown RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 MTMR2Q13614 643 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 C9orf131Q5VYM1 1079 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 SPC24Q8NBT2 197 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 PAGE5Q96GU1 130 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 EDIL3O43854 480 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 MARCH6O60337 910 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 STAT6P42226 847 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 DNAJC14Q6Y2X3 702 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 FCHSD1Q86WN1 690 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms