RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NUGGCQ68CJ6 796 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CYP26C1Q6V0L0 522 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 G2E3Q7L622 706 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 MYLK4Q86YV6 388 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CACNA2D3Q8IZS8 1091 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 PIK3R5Q8WYR1 880 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 CCT6BQ92526 530 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 SEC16BQ96JE7 1060 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 NEK1Q96PY6 1258 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 MAF1Q9H063 256 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 IQCGQ9H095 443 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 HAUS4Q9H6D7 363 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 IL21Q9HBE4 155 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.29□□□□□ -1.561e-7■■■■■ 50.3
SNRNP40-206ENST00000489853 HPSEQ9Y251 543 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 LEMD3Q9Y2U8 911 aa5.29□□□□□ -1.56
SNRNP40-206ENST00000489853 WDR17Q8IZU2 1322 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 OVOS2A0A0G2JMS6 1433 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 OVOS2A0A0J9YW53 1432 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 OVOS2Q6IE36 1432 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 GPR75-ASB3A0A0A6YYF3 556 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 PTPDC1A2A3K4 754 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 LRRD1A4D1F6 860 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 KIF3BO15066 747 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 TRAPPC3O43617 180 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CREB3O43889 395 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 MFAP3LO75121 409 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CTDNEP1O95476 244 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ECEL1O95672 775 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 UBTFL1P0CB47 393 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 TCF3P15923 654 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ALDH1B1P30837 517 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 HSPA1LP34931 641 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 PBX1P40424 430 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CTCFP49711 727 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 USP4Q13107 963 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 NMIQ13287 307 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 COL9A3Q14050 684 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 LBRQ14739 615 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 SLC39A14Q15043 492 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 PPP1R7Q15435 360 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CFAP58Q5T655 872 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC102BQ68D86 513 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 HIBCHQ6NVY1 386 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 TSHZ1Q6ZSZ6 1077 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 PPP1R42Q7Z4L9 355 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 MAATS1Q7Z4T9 603 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 MREGQ8N565 214 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC63Q8NA47 563 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ATP6V1G3Q96LB4 118 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ZIM3Q96PE6 472 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CTAGE1Q96RT6 745 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 TSPAN18Q96SJ8 248 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 SLX1AQ9BQ83 275 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 USP44Q9H0E7 712 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 NDST4Q9H3R1 872 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 WDR35Q9P2L0 1181 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 RGS17Q9UGC6 210 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 NFE2L3Q9Y4A8 694 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ASB3Q9Y575 518 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CLIC4Q9Y696 253 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 MYH15Q9Y2K3 1946 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 SYCP2Q9BX26 1530 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 ITIH6Q6UXX5 1313 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 SH3TC1Q8TE82 1336 aa5.28□□□□□ -1.56
SNRNP40-206ENST00000489853 CD163L1Q9NR16 1453 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKRD26Q9UPS8 1709 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CRYBG1Q9Y4K1 1723 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ANO9A1A5B4 782 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CCT8L1PA6NM43 557 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 OPLAHO14841 1288 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 DIAPH2O60879 1101 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 KIF4AO95239 1232 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 MYL1P05976 194 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 CCNYL3P0C7X3 344 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ALDH3A1P30838 453 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 MXRA7P84157 204 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 LMNB2Q03252 620 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PTK2Q05397 1052 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 PDE4BQ07343 736 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ITGB3BPQ13352 177 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 SEPT2Q15019 361 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ZRSR2Q15696 482 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ECM1Q16610 540 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 IFI16Q16666 785 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 SWI5Q1ZZU3 235 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 SGSM1Q2NKQ1 1148 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ZMYM1Q5SVZ6 1142 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 GKAP1Q5VSY0 366 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 ANO1Q5XXA6 986 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 KCTD16Q68DU8 428 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 HDGFL2Q7Z4V5 671 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 APBB1IPQ7Z5R6 666 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
SNRNP40-206ENST00000489853 GSPT2Q8IYD1 628 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms