RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 CDCP2Q5VXM1 449 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 MRM1Q6IN84 353 aaKnown RBP4.74□□□□□ -1.65
HFM1-208ENST00000488023 TSHZ1Q6ZSZ6 1077 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 OXR1Q8N573 874 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 ASPNQ9BXN1 380 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
HFM1-208ENST00000488023 GCM1Q9NP62 436 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 GPATCH2Q9NW75 528 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 PLAAQ9Y263 795 aa4.74□□□□□ -1.65
HFM1-208ENST00000488023 A0A087X0B3 334 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 TEX51A0A1B0GUA7 166 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 FITM1A5D6W6 292 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 OVOL3O00110 214 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 TSPAN6O43657 245 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 FAM153BP0C7A2 387 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 PAX3P23760 479 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 PDE6BP35913 854 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 UBE4AQ14139 1066 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 ZNF385BQ569K4 471 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 TCERG1LQ5VWI1 586 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 TMEM132EQ6IEE7 984 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 NIM1KQ8IY84 436 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 DTWD2Q8NBA8 298 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 ATG4CQ96DT6 458 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 INTS4Q96HW7 963 aaKnown RBP4.73□□□□□ -1.65
HFM1-208ENST00000488023 CNNM2Q9H8M5 875 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 KLHL3Q9UH77 587 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 DUSP13Q9UII6 198 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 YBX2Q9Y2T7 364 aaKnown RBP4.73□□□□□ -1.65
HFM1-208ENST00000488023 KCTD3Q9Y597 815 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 PPFIA4O75335 1185 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 ACRP10323 421 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 IMPDH2P12268 514 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 CASP7P55210 303 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 NR0B2Q15466 257 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
HFM1-208ENST00000488023 PHACTR4Q8IZ21 702 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 NINJ1Q92982 152 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 MFSD3Q96ES6 412 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 KREMEN1Q96MU8 473 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 SGPP1Q9BX95 441 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 GMIPQ9P107 970 aa4.73□□□□□ -1.65
HFM1-208ENST00000488023 WASHC2CQ9Y4E1 1318 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 TNFRSF10CO14798 259 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 AKAP8O43823 692 aaKnown RBP4.72□□□□□ -1.65
HFM1-208ENST00000488023 PDE8AO60658 829 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 GBP1P32455 592 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 PPP2R5AQ15172 486 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 RALBP1Q15311 655 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 CT47A1Q5JQC4 288 aaPredicted RBP4.72□□□□□ -1.65
HFM1-208ENST00000488023 OVOS1Q6IE37 1185 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 FAM178BQ8IXR5 827 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 SYNPOQ8N3V7 929 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 TAB3Q8N5C8 712 aaPredicted RBP4.72□□□□□ -1.65
HFM1-208ENST00000488023 OR6P1Q8NGX9 317 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 CAAP1Q9H8G2 361 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 CHST12Q9NRB3 414 aa4.72□□□□□ -1.65
HFM1-208ENST00000488023 A0A1W2PQH9 124 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 SHTN1A0MZ66 631 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 OTOL1A6NHN0 477 aaPredicted RBP4.71□□□□□ -1.66
HFM1-208ENST00000488023 RGS13O14921 159 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 KATNA1O75449 491 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 SCGB1D2O95969 90 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 INSRRP14616 1297 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 NME1P15531 152 aaKnown RBP4.71□□□□□ -1.66
HFM1-208ENST00000488023 RNF4P78317 190 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 PABPC4Q13310 644 aaKnown RBP eCLIP4.71□□□□□ -1.66
HFM1-208ENST00000488023 SYCP2LQ5T4T6 812 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
HFM1-208ENST00000488023 C14orf80Q86SX3 495 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 RNF180Q86T96 592 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 TMEM151BQ8IW70 566 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 ZSWIM2Q8NEG5 633 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 ST13P5Q8NFI4 369 aaPredicted RBP4.71□□□□□ -1.66
HFM1-208ENST00000488023 SLC39A13Q96H72 371 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 MPHOSPH6Q99547 160 aaKnown RBP4.71□□□□□ -1.66
HFM1-208ENST00000488023 KIF2CQ99661 725 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 APBA2Q99767 749 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 PCDHA11Q9Y5I1 949 aa4.71□□□□□ -1.66
HFM1-208ENST00000488023 RFXAPO00287 272 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 KIF3BO15066 747 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 RAG1P15918 1043 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 EPHB1P54762 984 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 MCL1Q07820 350 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 EFEMP1Q12805 493 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 PUM1Q14671 1186 aaKnown RBP eCLIP4.7□□□□□ -1.665e-6■□□□□ 8.5
HFM1-208ENST00000488023 SSPNQ14714 243 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 SNX17Q15036 470 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 LRRFIP1Q32MZ4 808 aaKnown RBP4.7□□□□□ -1.66
HFM1-208ENST00000488023 C4orf46Q504U0 113 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 CCSAPQ6IQ19 270 aaPredicted RBP4.7□□□□□ -1.66
HFM1-208ENST00000488023 NLRC3Q7RTR2 1065 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 SPPL2CQ8IUH8 684 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 VWCEQ96DN2 955 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 SLC9A7Q96T83 725 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.7□□□□□ -1.66
HFM1-208ENST00000488023 ALG1L2C9J202 215 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 ADCY3O60266 1144 aa4.7□□□□□ -1.66
HFM1-208ENST00000488023 LRRN2O75325 713 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms