RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 MPHOSPH6Q99547 160 aaKnown RBP19.74■□□□□ 0.75
VIM-205ENST00000485947 ZHX1Q9UKY1 873 aaPredicted RBP19.74■□□□□ 0.75
VIM-205ENST00000485947 ADAMTS4O75173 837 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 PARP1P09874 1014 aaKnown RBP19.73■□□□□ 0.75
VIM-205ENST00000485947 CNTN2Q02246 1040 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 MUM1L1Q5H9M0 696 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 ANO1Q5XXA6 986 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 PCSK9Q8NBP7 692 aaKnown RBP19.73■□□□□ 0.75
VIM-205ENST00000485947 KLHDC9Q8NEP7 349 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 NUP133Q8WUM0 1156 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 CHMP4CQ96CF2 233 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 LRCH3Q96II8 777 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 TMX3Q96JJ7 454 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 KATNBL1Q9H079 304 aa19.73■□□□□ 0.75
VIM-205ENST00000485947 ALPK3Q96L96 1907 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 ERICH2A1L162 156 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 SOWAHBA6NEL2 793 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 B4DLN1 442 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 ADCYAP1R1P41586 468 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 MRPL12P52815 198 aaKnown RBP19.72■□□□□ 0.75
VIM-205ENST00000485947 SNAP25P60880 206 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 SEC23AQ15436 765 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 CCDC144BQ3MJ40 725 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 NSMFQ6X4W1 530 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 BRF1Q92994 677 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 UPF3AQ9H1J1 476 aaKnown RBP19.72■□□□□ 0.75
VIM-205ENST00000485947 PRKAG2Q9UGJ0 569 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 ZMYND8Q9ULU4 1186 aaPredicted RBP19.72■□□□□ 0.75
VIM-205ENST00000485947 Q9Y3F1 56 aa19.72■□□□□ 0.75
VIM-205ENST00000485947 SH2B2O14492 632 aaPredicted RBP19.71■□□□□ 0.75
VIM-205ENST00000485947 PGK1P00558 417 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 LIFRP42702 1097 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 EVCP57679 992 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 GJA9P57773 515 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 RTP1P59025 263 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 TRAF1Q13077 416 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 CUL4AQ13619 759 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 IQSEC1Q6DN90 963 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 NOL8Q76FK4 1167 aaKnown RBP19.71■□□□□ 0.75
VIM-205ENST00000485947 CHST3Q7LGC8 479 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 DNERQ8NFT8 737 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 CLEC4DQ8WXI8 215 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 VTA1Q9NP79 307 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
VIM-205ENST00000485947 SMCHD1A6NHR9 2005 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 HSP90AA1P07900 732 aaKnown RBP19.7■□□□□ 0.74
VIM-205ENST00000485947 ATN1P54259 1190 aaPredicted RBP19.7■□□□□ 0.74
VIM-205ENST00000485947 BAATQ14032 418 aaPredicted RBP19.7■□□□□ 0.74
VIM-205ENST00000485947 CCSAPQ6IQ19 270 aaPredicted RBP19.7■□□□□ 0.74
VIM-205ENST00000485947 RNF207Q6ZRF8 634 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 TMTC2Q8N394 836 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 SEZ6LQ9BYH1 1024 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 LRRC2Q9BYS8 371 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 ELP1O95163 1332 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 ABCB11O95342 1321 aa19.7■□□□□ 0.74
VIM-205ENST00000485947 NFIBO00712 420 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 IFIT3O14879 490 aaKnown RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 MAGEA10P43363 369 aaPredicted RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 ACLYP53396 1101 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 TNFAIP2Q03169 654 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 TMEM67Q5HYA8 995 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 SGMS1Q86VZ5 419 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 MCF2L2Q86YR7 1114 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 ADGRF4Q8IZF3 695 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 SAMD3Q8N6K7 520 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 IGDCC4Q8TDY8 1250 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 ZNF274Q96GC6 653 aaPredicted RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 INTS4Q96HW7 963 aaKnown RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 TOX2Q96NM4 488 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 LBHD1Q9BQE6 289 aaPredicted RBP19.69■□□□□ 0.74
VIM-205ENST00000485947 TPCN1Q9ULQ1 816 aa19.69■□□□□ 0.74
VIM-205ENST00000485947 A0A1W2PQ45 241 aaPredicted RBP19.68■□□□□ 0.74
VIM-205ENST00000485947 A0A1W2PQY0 241 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 PTPDC1A2A3K4 754 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 GOLGA8HP0CJ92 632 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 SYN1P17600 705 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 WTAPQ15007 396 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
VIM-205ENST00000485947 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 UBA5Q9GZZ9 404 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 MAP3K20Q9NYL2 800 aaKnown RBP19.68■□□□□ 0.74
VIM-205ENST00000485947 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
VIM-205ENST00000485947 CABYRO75952 493 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 C6orf222P0C671 652 aaPredicted RBP19.67■□□□□ 0.74
VIM-205ENST00000485947 ALDH5A1P51649 535 aaPredicted RBP19.67■□□□□ 0.74
VIM-205ENST00000485947 RPS6P62753 249 aaKnown RBP19.67■□□□□ 0.74
VIM-205ENST00000485947 APOBRQ0VD83 1088 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 KCNA10Q16322 511 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 ME3Q16798 604 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 ANKRD33Q7Z3H0 272 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 LY9Q9HBG7 655 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 STARD7Q9NQZ5 370 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 GNEQ9Y223 722 aaKnown RBP19.67■□□□□ 0.74
VIM-205ENST00000485947 MRPL11Q9Y3B7 192 aaKnown RBP19.67■□□□□ 0.74
VIM-205ENST00000485947 ASTN1O14525 1302 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 MROH7Q68CQ1 1323 aa19.67■□□□□ 0.74
VIM-205ENST00000485947 PALM3A6NDB9 673 aaPredicted RBP19.66■□□□□ 0.74
VIM-205ENST00000485947 KLRF2D3W0D1 207 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms