RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 ALDH8A1Q9H2A2 487 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 TOMM22Q9NS69 142 aa16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 RAD50Q92878 1312 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 RABGGTBP53611 331 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 SYDE2Q5VT97 1194 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 OTUD7AQ8TE49 926 aaPredicted RBP16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 SCLYQ96I15 445 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 PURBQ96QR8 312 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
SMARCD3-211ENST00000485592 TNKSO95271 1327 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 FOXP2O15409 715 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 ORC4O43929 436 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 MYL3P08590 195 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 SLC16A2P36021 539 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 NOVP48745 357 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 PURAQ00577 322 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 TMEM63BQ5T3F8 832 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 ADAMTS19Q8TE59 1207 aa16.2■□□□□ 0.18
SMARCD3-211ENST00000485592 FRMPD2Q68DX3 1309 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 NFIBO00712 420 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 CYP2C9P11712 490 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 ACTN1P12814 892 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 PPP2R5BQ15173 497 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 UHRF1Q96T88 793 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 MTG1Q9BT17 334 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-211ENST00000485592 TANC1Q9C0D5 1861 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 NKRFO15226 690 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 COL9A1P20849 921 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 CALML3P27482 149 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 PDE4DQ08499 809 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 SLC30A10Q6XR72 485 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 DEFB128Q7Z7B8 93 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 GPCPD1Q9NPB8 672 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
SMARCD3-211ENST00000485592 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 RBM47A0AV96 593 aaKnown RBP16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 B4DLN1 442 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 FGRP09769 529 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 MYOGP15173 224 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 RFC2P35250 354 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 TTLL4Q14679 1199 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 ALX1Q15699 326 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 SLC9A7Q96T83 725 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 TCP11L1Q9NUJ3 509 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
SMARCD3-211ENST00000485592 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 KPNA6O60684 536 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 PDHBP11177 359 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 SKIV2LQ15477 1246 aaKnown RBP16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 AAK1Q2M2I8 961 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 NFRKBQ6P4R8 1299 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 RETREG2Q8NC44 543 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 SCFD2Q8WU76 684 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 SALL3Q9BXA9 1300 aa16.16■□□□□ 0.18
SMARCD3-211ENST00000485592 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 FGAP02671 866 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 CA3P07451 260 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 RPS6P62753 249 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 BFSP2Q13515 415 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 CLEC4DQ8WXI8 215 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 VWCEQ96DN2 955 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 WDR19Q8NEZ3 1342 aa16.15■□□□□ 0.18
SMARCD3-211ENST00000485592 KIF28PB7ZC32 967 aa16.14■□□□□ 0.17
SMARCD3-211ENST00000485592 TXNP10599 105 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-211ENST00000485592 EDNRBP24530 442 aa16.14■□□□□ 0.17
SMARCD3-211ENST00000485592 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
SMARCD3-211ENST00000485592 MCMDC2Q4G0Z9 681 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms