RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 CRTAMO95727 393 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 ASLP04424 464 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 GRIK1P39086 918 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 CYP2R1Q6VVX0 501 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 MTDHQ86UE4 582 aaKnown RBP10.59□□□□□ -0.71
MCF2-207ENST00000483690 CCDC103Q8IW40 242 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 IFNL3Q8IZI9 196 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 SYTL4Q96C24 671 aaPredicted RBP10.59□□□□□ -0.71
MCF2-207ENST00000483690 SCLYQ96I15 445 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 MMP19Q99542 508 aa10.59□□□□□ -0.71
MCF2-207ENST00000483690 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 GSG1L2A8MUP6 293 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 RASGRP1O95267 797 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 TBC1D8O95759 1140 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 IGFALSP35858 605 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 GPR85P60893 370 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
MCF2-207ENST00000483690 DDX1Q92499 740 aaKnown RBP10.58□□□□□ -0.72
MCF2-207ENST00000483690 TCRBV16S1A1N1A0A5B0 115 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 ARNTLO00327 626 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 IGHA1P01876 353 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 FLT3P36888 993 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 IKZF1Q13422 519 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 LAPTM5Q13571 262 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 ZPBP2Q6X784 338 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 RNF180Q86T96 592 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.57□□□□□ -0.72
MCF2-207ENST00000483690 PCDHA9Q9Y5H5 950 aa10.57□□□□□ -0.72
MCF2-207ENST00000483690 B4E1Z4 1266 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 NEK4P51957 841 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 FCRL2Q96LA5 508 aaPredicted RBP10.56□□□□□ -0.72
MCF2-207ENST00000483690 ERVK13-1Q9NX77 482 aa10.56□□□□□ -0.72
MCF2-207ENST00000483690 ZNF460Q14592 562 aa10.55□□□□□ -0.72
MCF2-207ENST00000483690 INTS5Q6P9B9 1019 aaKnown RBP10.55□□□□□ -0.72
MCF2-207ENST00000483690 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
MCF2-207ENST00000483690 UBR7Q8N806 425 aa10.55□□□□□ -0.72
MCF2-207ENST00000483690 BSDC1Q9NW68 430 aaPredicted RBP10.55□□□□□ -0.72
MCF2-207ENST00000483690 PCDHA8Q9Y5H6 950 aa10.55□□□□□ -0.72
MCF2-207ENST00000483690 MYO1BO43795 1136 aa10.54□□□□□ -0.72
MCF2-207ENST00000483690 LCP1P13796 627 aa10.54□□□□□ -0.72
MCF2-207ENST00000483690 POU3F2P20265 443 aaPredicted RBP10.54□□□□□ -0.72
MCF2-207ENST00000483690 LBX2Q6XYB7 198 aa10.54□□□□□ -0.72
MCF2-207ENST00000483690 UBE2R2Q712K3 238 aaPredicted RBP10.54□□□□□ -0.72
MCF2-207ENST00000483690 RCBTB1Q8NDN9 531 aa10.54□□□□□ -0.72
MCF2-207ENST00000483690 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
MCF2-207ENST00000483690 MSCO60682 206 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 FURINP09958 794 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 JMJD7P0C870 316 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 INF2Q27J81 1249 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 KIZQ2M2Z5 673 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 HLA-DQA1Q5Y7H0 255 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 CARS2Q9HA77 564 aaKnown RBP10.53□□□□□ -0.72
MCF2-207ENST00000483690 ZNF281Q9Y2X9 895 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 PCDHA2Q9Y5H9 948 aa10.53□□□□□ -0.72
MCF2-207ENST00000483690 NFKB2Q00653 900 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 CFAP100Q494V2 611 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 MBLAC2Q68D91 279 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 ZC3H7AQ8IWR0 971 aaKnown RBP10.52□□□□□ -0.73
MCF2-207ENST00000483690 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.73
MCF2-207ENST00000483690 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 SLC5A6Q9Y289 635 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 ATP8A1Q9Y2Q0 1164 aa10.52□□□□□ -0.73
MCF2-207ENST00000483690 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 ARVCFO00192 962 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 KPNA6O60684 536 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 CD96P40200 585 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 BNIP3Q12983 259 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 PAK1Q13153 545 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 ANGEL2Q5VTE6 544 aaKnown RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 ZCCHC8Q6NZY4 707 aaKnown RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 DDX46Q7L014 1031 aaKnown RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 DDX53Q86TM3 631 aaKnown RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 JAMLQ86YT9 394 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 RPUSD2Q8IZ73 545 aaKnown RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 TMEM52Q8NDY8 209 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 TNFRSF10DQ9UBN6 386 aa10.51□□□□□ -0.73
MCF2-207ENST00000483690 TIMM13Q9Y5L4 95 aaPredicted RBP10.51□□□□□ -0.73
MCF2-207ENST00000483690 NPHS1O60500 1241 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 COBLO75128 1261 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 NPTXRO95502 500 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 RPL11P62913 178 aaKnown RBP10.5□□□□□ -0.73
MCF2-207ENST00000483690 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
MCF2-207ENST00000483690 DUSP4Q13115 394 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 MAP6Q96JE9 813 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 CHAMP1Q96JM3 812 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 MCM8Q9UJA3 840 aa10.5□□□□□ -0.73
MCF2-207ENST00000483690 C7orf72A4D263 438 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 CPEP16870 476 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 GTF2A2P52657 109 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 PCBP1Q15365 356 aaKnown RBP eCLIP10.49□□□□□ -0.73
MCF2-207ENST00000483690 PIK3R6Q5UE93 754 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 CDCA2Q69YH5 1023 aaPredicted RBP10.49□□□□□ -0.73
MCF2-207ENST00000483690 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms