RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ALS2Q96Q42 1657 aa5.17□□□□□ -1.58
LRCH3-217ENST00000483442 PNPLA7Q6ZV29 1317 aa5.17□□□□□ -1.58
LRCH3-217ENST00000483442 EIF3AQ14152 1382 aaKnown RBP5.16□□□□□ -1.58
LRCH3-217ENST00000483442 ATP7BP35670 1465 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 ANKRD33BA6NCL7 494 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 ZGLP1P0C6A0 271 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 LMNB1P20700 586 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 ATG14Q6ZNE5 492 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 COX4I2Q96KJ9 171 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 MPHOSPH9Q99550 1183 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 PARP2Q9UGN5 583 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 ADAM30Q9UKF2 790 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 IFT172Q9UG01 1749 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 WDR17Q8IZU2 1322 aa5.16□□□□□ -1.58
LRCH3-217ENST00000483442 SPATA31E1Q6ZUB1 1445 aa5.15□□□□□ -1.58
LRCH3-217ENST00000483442 COL5A2P05997 1499 aaPredicted RBP5.15□□□□□ -1.58
LRCH3-217ENST00000483442 SHISA3A0PJX4 238 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 FAM221AA4D161 298 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 NFIBO00712 420 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 DNAJA2O60884 412 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 EFEMP2O95967 443 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 PLCG1P19174 1290 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 ETV3P41162 512 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
LRCH3-217ENST00000483442 EGR3Q06889 387 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 TSPYL5Q86VY4 417 aaPredicted RBP5.15□□□□□ -1.59
LRCH3-217ENST00000483442 COL23A1Q86Y22 540 aaPredicted RBP5.15□□□□□ -1.59
LRCH3-217ENST00000483442 CYB5D2Q8WUJ1 264 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 SYTL4Q96C24 671 aaPredicted RBP5.15□□□□□ -1.59
LRCH3-217ENST00000483442 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 GPR62Q9BZJ7 368 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 EPB41L4BQ9H329 900 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 DUSP13Q9UII6 198 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.59
LRCH3-217ENST00000483442 PCDHA11Q9Y5I1 949 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 CD2APQ9Y5K6 639 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 USP19O94966 1318 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 AATKQ6ZMQ8 1374 aa5.15□□□□□ -1.59
LRCH3-217ENST00000483442 BCL9O00512 1426 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 USP6P35125 1406 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 SBF2Q86WG5 1849 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 CILPO75339 1184 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 F13A1P00488 732 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 TMEM253P0C7T8 217 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 GALK1P51570 392 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 DAB2P98082 770 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 PDE4BQ07343 736 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 KCNA10Q16322 511 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 EAPPQ56P03 285 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-217ENST00000483442 SIAH1Q8IUQ4 282 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 JMYQ8N9B5 988 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 FAM13CQ8NE31 585 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 ZSCAN18Q8TBC5 510 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-217ENST00000483442 BAHD1Q8TBE0 780 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-217ENST00000483442 CCDC120Q96HB5 630 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 NMRK2Q9NPI5 230 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 POLR3KQ9Y2Y1 108 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-217ENST00000483442 USP31Q70CQ4 1352 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 KNDC1Q76NI1 1749 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 PEAK1Q9H792 1746 aa5.14□□□□□ -1.59
LRCH3-217ENST00000483442 GOLGB1Q14789 3259 aaKnown RBP5.14□□□□□ -1.59
LRCH3-217ENST00000483442 TULP4Q9NRJ4 1543 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 ADAMTS20P59510 1910 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 MYOCOSA0A1B0GUC4 107 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 PF4P02776 101 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 RAC2P15153 192 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 TAF1CQ15572 869 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-217ENST00000483442 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 LILRA6Q6PI73 481 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 TTLL10Q6ZVT0 673 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 ARHGEF25Q86VW2 580 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 AMIGO3Q86WK7 504 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 C16orf71Q8IYS4 520 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-217ENST00000483442 TRAIPQ9BWF2 469 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 MCOLN1Q9GZU1 580 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 PARP4Q9UKK3 1724 aaKnown RBP5.13□□□□□ -1.59
LRCH3-217ENST00000483442 CRYBG1Q9Y4K1 1723 aa5.13□□□□□ -1.59
LRCH3-217ENST00000483442 POLR3AO14802 1390 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-217ENST00000483442 BRD4O60885 1362 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-217ENST00000483442 RGPD3A6NKT7 1758 aaPredicted RBP5.12□□□□□ -1.59
LRCH3-217ENST00000483442 RGPD4Q7Z3J3 1758 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 NOTOA8MTQ0 251 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 IL2RBP14784 551 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 GLDCP23378 1020 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 CAMK2GQ13555 558 aaPredicted RBP5.12□□□□□ -1.59
LRCH3-217ENST00000483442 PDZD8Q8NEN9 1154 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 FBXO27Q8NI29 283 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 KCNN1Q92952 543 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 SHISA4Q96DD7 197 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 VWCEQ96DN2 955 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 RHOVQ96L33 236 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 NOC4LQ9BVI4 516 aaKnown RBP5.12□□□□□ -1.59
LRCH3-217ENST00000483442 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
LRCH3-217ENST00000483442 REV1Q9UBZ9 1251 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 CCNL1Q9UK58 526 aaPredicted RBP5.12□□□□□ -1.59
LRCH3-217ENST00000483442 IGSF1Q8N6C5 1336 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 ADCY9O60503 1353 aa5.12□□□□□ -1.59
LRCH3-217ENST00000483442 KAT6BQ8WYB5 2073 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms