RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 SRBD1Q8N5C6 995 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 NCOA5Q9HCD5 579 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 A1CFQ9NQ94 594 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 hCG_1642624A0A1W2PR95 340 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 SOX1O00570 391 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-210ENST00000483417 ADCY6O43306 1168 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 PGK1P00558 417 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 PARP1P09874 1014 aaKnown RBP11.17□□□□□ -0.62
HMG20B-210ENST00000483417 RTP1P59025 263 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 NKX3-2P78367 333 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 FGD1P98174 961 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 STK3Q13188 491 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 MUM1L1Q5H9M0 696 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 ADGRF4Q8IZF3 695 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-210ENST00000483417 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 RNF146Q9NTX7 359 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 FAM184BQ9ULE4 1060 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-210ENST00000483417 CNPY2Q9Y2B0 182 aa11.17□□□□□ -0.62
HMG20B-210ENST00000483417 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 CTAGE5O15320 804 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 DUSP11O75319 330 aaKnown RBP11.16□□□□□ -0.62
HMG20B-210ENST00000483417 ICAM1P05362 532 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 ALAS1P13196 640 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
HMG20B-210ENST00000483417 FUT2Q10981 343 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
HMG20B-210ENST00000483417 ME3Q16798 604 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 SYDE2Q5VT97 1194 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 CCDC174Q6PII3 467 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 ARMCX2Q7L311 632 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 RNF180Q86T96 592 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 MICU3Q86XE3 530 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 CLEC4DQ8WXI8 215 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 TSEN34Q9BSV6 310 aaKnown RBP11.16□□□□□ -0.62
HMG20B-210ENST00000483417 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
HMG20B-210ENST00000483417 HOMER2Q9NSB8 354 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 CYP39A1Q9NYL5 469 aa11.16□□□□□ -0.62
HMG20B-210ENST00000483417 SZT2Q5T011 3432 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 MYADML2A6NDP7 307 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 ZBTB43O43298 467 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
HMG20B-210ENST00000483417 ST3GAL1Q11201 340 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 MORC4Q8TE76 937 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 TBC1D5Q92609 795 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 ZNF274Q96GC6 653 aaPredicted RBP11.15□□□□□ -0.62
HMG20B-210ENST00000483417 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
HMG20B-210ENST00000483417 UPF3AQ9H1J1 476 aaKnown RBP11.15□□□□□ -0.62
HMG20B-210ENST00000483417 CCPG1Q9ULG6 757 aa11.15□□□□□ -0.62
HMG20B-210ENST00000483417 CEP290O15078 2479 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 A0A1W2PQ45 241 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 A0A1W2PQY0 241 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 DDAH1O94760 285 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 CST5P28325 142 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 ACLYP53396 1101 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 GJA9P57773 515 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 MDM2Q00987 491 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 TLE2Q04725 743 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 SCRN1Q12765 414 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 RABEP1Q15276 862 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 NTRK3Q16288 839 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 ASPRV1Q53RT3 343 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 TAPT1Q6NXT6 567 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 TDHQ8IZJ6 230 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 PIGSQ96S52 555 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 UBE2OQ9C0C9 1292 aaKnown RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms