RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 OXCT1P55809 520 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 MAP2K1Q02750 393 aaPredicted RBP9.46□□□□□ -0.9
CBX3-206ENST00000481057 SFRP5Q5T4F7 317 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 SZT2Q5T011 3432 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.9
CBX3-206ENST00000481057 CYP7A1P22680 504 aa9.45□□□□□ -0.9
CBX3-206ENST00000481057 GRIK1P39086 918 aa9.45□□□□□ -0.9
CBX3-206ENST00000481057 C19orf47Q8N9M1 422 aaKnown RBP9.45□□□□□ -0.9
CBX3-206ENST00000481057 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
CBX3-206ENST00000481057 CEP162Q5TB80 1403 aa9.45□□□□□ -0.9
CBX3-206ENST00000481057 PRR33A8MZF0 331 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 RBAK-RBAKDNI3L0D1 243 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 CEACAM5P06731 702 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 ZNF865P0CJ78 1059 aaPredicted RBP9.44□□□□□ -0.9
CBX3-206ENST00000481057 MSMPQ1L6U9 139 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
CBX3-206ENST00000481057 KREMEN1Q96MU8 473 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 HIRIP3Q9BW71 556 aaPredicted RBP9.44□□□□□ -0.9
CBX3-206ENST00000481057 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
CBX3-206ENST00000481057 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
CBX3-206ENST00000481057 MRVI1Q9Y6F6 885 aa9.44□□□□□ -0.9
CBX3-206ENST00000481057 VIRMAQ69YN4 1812 aaKnown RBP9.44□□□□□ -0.9
CBX3-206ENST00000481057 LRRC37A3O60309 1634 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 IQGAP3Q86VI3 1631 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 NRXN1Q9ULB1 1477 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 GNAT3A8MTJ3 354 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 COBLO75128 1261 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 VEGFAP15692 232 aaPredicted RBP9.43□□□□□ -0.9
CBX3-206ENST00000481057 ZYXQ15942 572 aaKnown RBP9.43□□□□□ -0.9
CBX3-206ENST00000481057 TMEM192Q8IY95 271 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 ASPNQ9BXN1 380 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 TANGO6Q9C0B7 1094 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 ZNF408Q9H9D4 720 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
CBX3-206ENST00000481057 FAM86C2PA6NEL3 165 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 ITIH2P19823 946 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 KIR3DL1P43629 444 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 CD97P48960 835 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 UNC5AQ6ZN44 842 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 PLD6Q8N2A8 252 aaKnown RBP9.42□□□□□ -0.9
CBX3-206ENST00000481057 MFSD4AQ8N468 514 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 VWCEQ96DN2 955 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 SLC6A18Q96N87 628 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
CBX3-206ENST00000481057 TUBGCP6Q96RT7 1819 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 CLEC3AO75596 197 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 CBX7O95931 251 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 ETFBP38117 255 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 CASP7P55210 303 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 RNF4P78317 190 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 NKPD1Q17RQ9 610 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
CBX3-206ENST00000481057 SPACA3Q8IXA5 215 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 Q96M66 194 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 PLAGL2Q9UPG8 496 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 FMN2Q9NZ56 1722 aa9.41□□□□□ -0.9
CBX3-206ENST00000481057 CRYBG1Q9Y4K1 1723 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 A0A1W2PQH9 124 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 KIAA1324LA8MWY0 1029 aaPredicted RBP9.4□□□□□ -0.9
CBX3-206ENST00000481057 SMAD7O15105 426 aaKnown RBP9.4□□□□□ -0.9
CBX3-206ENST00000481057 MED26O95402 600 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 SF3A1Q15459 793 aaKnown RBP9.4□□□□□ -0.9
CBX3-206ENST00000481057 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 PRKAG3Q9UGI9 489 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 SLC12A7Q9Y666 1083 aa9.4□□□□□ -0.9
CBX3-206ENST00000481057 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 SPINK2P20155 84 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 SSTR4P31391 388 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 IFI16Q16666 785 aaKnown RBP9.39□□□□□ -0.91
CBX3-206ENST00000481057 TNNI3KQ59H18 835 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 NBPF12Q5TAG4 269 aaPredicted RBP9.39□□□□□ -0.91
CBX3-206ENST00000481057 DTWD2Q8NBA8 298 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
CBX3-206ENST00000481057 DHRS1Q96LJ7 313 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 SUCOQ9UBS9 1254 aaKnown RBP9.39□□□□□ -0.91
CBX3-206ENST00000481057 RGPD8O14715 1765 aaPredicted RBP9.39□□□□□ -0.91
CBX3-206ENST00000481057 PKD1L3Q7Z443 1732 aa9.39□□□□□ -0.91
CBX3-206ENST00000481057 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 MEGF6O75095 1541 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 FAM155AB1AL88 458 aaPredicted RBP9.38□□□□□ -0.91
CBX3-206ENST00000481057 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 CLCN7P51798 805 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 PMS1P54277 932 aaKnown RBP9.38□□□□□ -0.91
CBX3-206ENST00000481057 TNK2Q07912 1038 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 PPP2R5EQ16537 467 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 PIWIL2Q8TC59 973 aaKnown RBP9.38□□□□□ -0.91
CBX3-206ENST00000481057 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
CBX3-206ENST00000481057 RNF181Q9P0P0 153 aa9.38□□□□□ -0.91
CBX3-206ENST00000481057 COL6A3P12111 3177 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms