RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 KIAA0586Q9BVV6 1533 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 GSTM1P09488 218 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 ECI1P42126 302 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 GABREP78334 506 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 TESK1Q15569 626 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 SF1Q15637 639 aaKnown RBP7.13□□□□□ -1.27
RFC4-212ENST00000479307 TKFCQ3LXA3 575 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 TRIM61Q5EBN2 209 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 RTP2Q5QGT7 225 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 E4F1Q66K89 784 aaPredicted RBP7.13□□□□□ -1.27
RFC4-212ENST00000479307 CYP2R1Q6VVX0 501 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 SLC5A6Q9Y289 635 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 ABCC2Q92887 1545 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 ASXL2Q76L83 1435 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 ANKRD62A6NC57 917 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 PPP1R12AO14974 1030 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 FGF10O15520 208 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 KCNQ2O43526 872 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 EFCAB14O75071 495 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 THBDP07204 575 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 GYS2P54840 703 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 TEKQ02763 1124 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 IKZF1Q13422 519 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 RNF187Q5TA31 235 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 ANGEL2Q5VTE6 544 aaKnown RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 IQCEQ6IPM2 695 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 MAMDC2Q7Z304 686 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 KREMEN2Q8NCW0 462 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 NPLOC4Q8TAT6 608 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 BCL7CQ8WUZ0 217 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 DCAF4Q8WV16 495 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 PTPRN2Q92932 1015 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 FCRL2Q96LA5 508 aaPredicted RBP7.12□□□□□ -1.27
RFC4-212ENST00000479307 CDADC1Q9BWV3 514 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 SFMBT1Q9UHJ3 866 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 ZNF281Q9Y2X9 895 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 CD2APQ9Y5K6 639 aa7.12□□□□□ -1.27
RFC4-212ENST00000479307 TMEM82A0PJX8 343 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 C6orf222P0C671 652 aaPredicted RBP7.11□□□□□ -1.27
RFC4-212ENST00000479307 PAMP19021 973 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 CD97P48960 835 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 KCNAB2Q13303 367 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 RSPO2Q6UXX9 243 aaPredicted RBP7.11□□□□□ -1.27
RFC4-212ENST00000479307 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 VSIG10LQ86VR7 867 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 DTX1Q86Y01 620 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 PPIL6Q8IXY8 311 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 NINJ1Q92982 152 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 ZFYVE21Q9BQ24 234 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
RFC4-212ENST00000479307 EPRSP07814 1512 aaKnown RBP7.11□□□□□ -1.27
RFC4-212ENST00000479307 KIAA1324LA8MWY0 1029 aaPredicted RBP7.1□□□□□ -1.27
RFC4-212ENST00000479307 MEFVO15553 781 aaPredicted RBP7.1□□□□□ -1.27
RFC4-212ENST00000479307 FKTNO75072 461 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 TBC1D8O95759 1140 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 NAT1P18440 290 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 RPL10P27635 214 aaKnown RBP7.1□□□□□ -1.27
RFC4-212ENST00000479307 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 DALRD3Q5D0E6 543 aaKnown RBP7.1□□□□□ -1.27
RFC4-212ENST00000479307 STYK1Q6J9G0 422 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 NAT16Q8N8M0 369 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 FRS2Q8WU20 508 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 PTCHD1Q96NR3 888 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 MMP19Q99542 508 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 NPFFR2Q9Y5X5 522 aa7.1□□□□□ -1.27
RFC4-212ENST00000479307 MADDQ8WXG6 1647 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 AQP7O14520 342 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 APPP05067 770 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 PLS3P13797 630 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 SPINK2P20155 84 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 ITGB7P26010 798 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 DUSP4Q13115 394 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.271e-8■■■■■ 40.1
RFC4-212ENST00000479307 NTRK3Q16288 839 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 USP53Q70EK8 1073 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 WAPLQ7Z5K2 1190 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 KRTAP1-3Q8IUG1 177 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 NIM1KQ8IY84 436 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 GSTCDQ8NEC7 633 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 MFSD3Q96ES6 412 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 CCDC120Q96HB5 630 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
RFC4-212ENST00000479307 GPRC5CQ9NQ84 441 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 GPR27Q9NS67 375 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
RFC4-212ENST00000479307 ERVK13-1Q9NX77 482 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 CCDC39Q9UFE4 941 aa7.09□□□□□ -1.27
RFC4-212ENST00000479307 BCORL1Q5H9F3 1711 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 NPHP3-ACAD11A0A0J9YXS1 232 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 RAPGEF3O95398 923 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 CD8BP10966 210 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 LTBRP36941 435 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 ZP2Q05996 745 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 BNIP3Q12983 259 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 CBX2Q14781 532 aaPredicted RBP7.08□□□□□ -1.28
RFC4-212ENST00000479307 ZMYM1Q5SVZ6 1142 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 DENND5AQ6IQ26 1287 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 CLEC1BQ9P126 229 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 TNFRSF10DQ9UBN6 386 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms