RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 C3orf20Q8ND61 904 aa12.27□□□□□ -0.45
LRRFIP1-211ENST00000478958 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
LRRFIP1-211ENST00000478958 HAUS4Q9H6D7 363 aa12.27□□□□□ -0.45
LRRFIP1-211ENST00000478958 CHCHD3Q9NX63 227 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-211ENST00000478958 DDX20Q9UHI6 824 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-211ENST00000478958 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 DDX60Q8IY21 1712 aaKnown RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 PDE2AO00408 941 aaPredicted RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 PPFIA2O75334 1257 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CXCR5P32302 372 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 UBA7P41226 1012 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 STIM1Q13586 685 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 TRIM14Q14142 442 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 HPS3Q969F9 1004 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 NIP7Q9Y221 180 aaKnown RBP eCLIP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 H7C1D1 291 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 KRT86O43790 486 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 SETSIPP0DME0 302 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 FECHP22830 423 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 RAB27AP51159 221 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 DNA2P51530 1060 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 EZH2Q15910 746 aaKnown RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC178Q5BJE1 867 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 CSGALNACT2Q8N6G5 542 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 RIOK1Q9BRS2 568 aaKnown RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 HPCAL4Q9UM19 191 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 SAMM50Q9Y512 469 aa12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
LRRFIP1-211ENST00000478958 LGALS16A8MUM7 142 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 IRAK1P51617 712 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 INF2Q27J81 1249 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 WDR93Q6P2C0 686 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 TUBGCP2Q9BSJ2 902 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 NHEJ1Q9H9Q4 299 aaPredicted RBP12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZNHIT6Q9NWK9 470 aaKnown RBP12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 PSMD14O00487 310 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 SHOX2O60902 331 aaPredicted RBP12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 RPSAP08865 295 aaKnown RBP12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 RCAN1P53805 252 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 SLC8A3P57103 927 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 SLC7A5Q01650 507 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 PPP2R5BQ15173 497 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 DTHD1Q6ZMT9 781 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 STAG2Q8N3U4 1231 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 EHD4Q9H223 541 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 LRP6O75581 1613 aa12.25□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC194A0A1B0GVG4 234 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 PSMA7O14818 248 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 TUBB4BP68371 445 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 PPARDQ03181 441 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 KCNB1Q14721 858 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 B4GALNT4Q76KP1 1039 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ANKRD13CQ8N6S4 541 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 COG1Q8WTW3 980 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 HDAC7Q8WUI4 952 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 SELENOOQ9BVL4 669 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 EHD2Q9NZN4 543 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 PYGLP06737 847 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ABCD1P33897 745 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 HSPA2P54652 639 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 KRT83P78385 493 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 SNCBQ16143 134 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ARMCX6Q7L4S7 300 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 FAM76AQ8TAV0 307 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZNF384Q8TF68 577 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 LRWD1Q9UFC0 647 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 ECEL1O95672 775 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CALM1P0DP23 149 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CALM2P0DP24 149 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CALM3P0DP25 149 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CDCA2Q69YH5 1023 aaPredicted RBP12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 HEATR3Q7Z4Q2 680 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 LMBR1Q8WVP7 490 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 DNAJC7Q99615 494 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms