RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 SYMPKQ92797 1274 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 STAMBPL1Q96FJ0 436 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 SMARCAL1Q9NZC9 954 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 H7C1D1 291 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 ZNF263O14978 683 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 IFNAR1P17181 557 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 CYP27A1Q02318 531 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 CACNA2D3Q8IZS8 1091 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 SMCR8Q8TEV9 937 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 PUS7LQ9H0K6 701 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 C15orf41Q9Y2V0 281 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 XDHP47989 1333 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 PDS5AQ29RF7 1337 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 BUB1BO60566 1050 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 PAEPP09466 180 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 MYBL1P10243 752 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 CDK17Q00537 523 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 RIPK1Q13546 671 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 AKNAD1Q5T1N1 836 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 ARHGAP22Q7Z5H3 698 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 APPBP2Q92624 585 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 HVCN1Q96D96 273 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 A0A1B0GVG6 124 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 AHCYL1O43865 530 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 FESP07332 822 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 PAFAH1B1P43034 410 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 CASP7P55210 303 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 SLMAPQ14BN4 828 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 MMADHCQ9H3L0 296 aaPredicted RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.543e-9■■■■■ 69.6
ABCF1-205ENST00000475993 PAPOLBQ9NRJ5 636 aaKnown RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 ZNHIT6Q9NWK9 470 aaKnown RBP11.67□□□□□ -0.54
ABCF1-205ENST00000475993 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
ABCF1-205ENST00000475993 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 H7C1W4 665 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
ABCF1-205ENST00000475993 HSPA9P38646 679 aaKnown RBP11.66□□□□□ -0.54
ABCF1-205ENST00000475993 ZNF658Q5TYW1 1059 aaPredicted RBP11.66□□□□□ -0.54
ABCF1-205ENST00000475993 LMBR1LQ6UX01 489 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 COPS6Q7L5N1 327 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 MFN1Q8IWA4 741 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 EPB41L5Q9HCM4 733 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 PLAAQ9Y263 795 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 GPAA1O43292 621 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 USO1O60763 962 aaKnown RBP11.66□□□□□ -0.54
ABCF1-205ENST00000475993 CXCR5P32302 372 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 BAIAP2L1Q9UHR4 511 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 NID2Q14112 1375 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 SIPA1L3O60292 1781 aaPredicted RBP11.66□□□□□ -0.54
ABCF1-205ENST00000475993 MYH10P35580 1976 aa11.66□□□□□ -0.54
ABCF1-205ENST00000475993 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 HEXIM1O94992 359 aaKnown RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 MOCS3O95396 460 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 SRGNP10124 158 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 EEF1GP26641 437 aaKnown RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 IL15P40933 162 aaPredicted RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 GUCY2FP51841 1108 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 GUCY2DQ02846 1103 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 LRRC23Q53EV4 343 aaPredicted RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 HIBCHQ6NVY1 386 aaPredicted RBP11.65□□□□□ -0.54
ABCF1-205ENST00000475993 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 ATL2Q8NHH9 583 aa11.65□□□□□ -0.54
ABCF1-205ENST00000475993 CCHCR1Q8TD31 782 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms