RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PDPK1O15530 556 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 SCG5P05408 212 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
SMC5-203ENST00000475540 OLFML2BQ68BL8 750 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 BICRALQ6AI39 1079 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 KRTAP19-1Q8IUB9 90 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 FRS2Q8WU20 508 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 TNFRSF12AQ9NP84 129 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 MSRB2Q9Y3D2 182 aa9.91□□□□□ -0.82
SMC5-203ENST00000475540 C7orf72A4D263 438 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 CCDC85CA6NKD9 419 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 HRKO00198 91 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 NR1I3Q14994 352 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 RAB3GAP1Q15042 981 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 NPLOC4Q8TAT6 608 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 ZNF669Q96BR6 464 aaPredicted RBP9.9□□□□□ -0.82
SMC5-203ENST00000475540 MCOLN1Q9GZU1 580 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 GOLGA2P5Q9HBQ8 144 aa9.9□□□□□ -0.82
SMC5-203ENST00000475540 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 NFIBO00712 420 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 TACR1P25103 407 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 GFRA1P56159 465 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
SMC5-203ENST00000475540 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
SMC5-203ENST00000475540 CYP4F3Q08477 520 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 SF1Q15637 639 aaKnown RBP9.89□□□□□ -0.83
SMC5-203ENST00000475540 E4F1Q66K89 784 aaPredicted RBP9.89□□□□□ -0.83
SMC5-203ENST00000475540 LRRC47Q8N1G4 583 aaKnown RBP9.89□□□□□ -0.83
SMC5-203ENST00000475540 LZTR1Q8N653 840 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 USP33Q8TEY7 942 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 SIRT5Q9NXA8 310 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 KLHL14Q9P2G3 628 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 GULP1Q9UBP9 304 aa9.89□□□□□ -0.83
SMC5-203ENST00000475540 MYOCOSA0A1B0GUC4 107 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
SMC5-203ENST00000475540 RASGRF1Q13972 1273 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 ZNF124Q15973 351 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 PAQR3Q6TCH7 311 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 CABP7Q86V35 215 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 DIO2Q92813 273 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 RWDD3Q9Y3V2 267 aa9.88□□□□□ -0.83
SMC5-203ENST00000475540 TEX51A0A1B0GUA7 166 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 SEMA7AO75326 666 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 CAPNS1P04632 268 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 CYBBP04839 570 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 YBX3P16989 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMC5-203ENST00000475540 GRIA2P42262 883 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 RAP1GAPP47736 663 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 CBX2Q14781 532 aaPredicted RBP9.87□□□□□ -0.83
SMC5-203ENST00000475540 PRSS53Q2L4Q9 553 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 MTERF2Q49AM1 385 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 KCTD13Q8WZ19 329 aa9.87□□□□□ -0.83
SMC5-203ENST00000475540 AARSD1Q9BTE6 412 aaKnown RBP9.87□□□□□ -0.83
SMC5-203ENST00000475540 ETV2O00321 342 aaPredicted RBP9.86□□□□□ -0.83
SMC5-203ENST00000475540 PPP1R11O60927 126 aaPredicted RBP9.86□□□□□ -0.83
SMC5-203ENST00000475540 VIPR1P32241 457 aa9.86□□□□□ -0.83
SMC5-203ENST00000475540 TMEM145Q8NBT3 493 aa9.86□□□□□ -0.83
SMC5-203ENST00000475540 KREMEN2Q8NCW0 462 aa9.86□□□□□ -0.83
SMC5-203ENST00000475540 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
SMC5-203ENST00000475540 IER2Q9BTL4 223 aa9.86□□□□□ -0.83
SMC5-203ENST00000475540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMC5-203ENST00000475540 KRTAP4-8A0A0G2JLE6 195 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 SRGAP3O43295 1099 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 TSPAN15O95858 294 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 DBHP09172 617 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 GLDCP23378 1020 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 KCNAB2Q13303 367 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 SERINC3Q13530 473 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 INF2Q27J81 1249 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 ACBD5Q5T8D3 534 aaPredicted RBP9.85□□□□□ -0.83
SMC5-203ENST00000475540 MBLAC2Q68D91 279 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 RPTNQ6XPR3 784 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 LRP10Q7Z4F1 713 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 PPIL6Q8IXY8 311 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 SPATA9Q9BWV2 254 aa9.85□□□□□ -0.83
SMC5-203ENST00000475540 TMEFF2Q9UIK5 374 aaPredicted RBP9.85□□□□□ -0.83
SMC5-203ENST00000475540 DBR1Q9UK59 544 aaKnown RBP9.85□□□□□ -0.83
SMC5-203ENST00000475540 F8W031 263 aaPredicted RBP9.84□□□□□ -0.83
SMC5-203ENST00000475540 FUCA1P04066 466 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 C1QTNF9P0C862 333 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 LTBRP36941 435 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 MAPKAPK2P49137 400 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 DLG4P78352 724 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 MAP4K2Q12851 820 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 IFRD2Q12894 506 aaPredicted RBP9.84□□□□□ -0.83
SMC5-203ENST00000475540 ZC3H14Q6PJT7 736 aaKnown RBP9.84□□□□□ -0.83
SMC5-203ENST00000475540 ATG14Q6ZNE5 492 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 SPATC1Q76KD6 591 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 MTA3Q9BTC8 594 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 BTG4Q9NY30 223 aa9.84□□□□□ -0.83
SMC5-203ENST00000475540 TIMM13Q9Y5L4 95 aaPredicted RBP9.84□□□□□ -0.83
SMC5-203ENST00000475540 TRAV20A0A0B4J274 112 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 TCAF2A6NFQ2 919 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 PRODHO43272 600 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 MYO1BO43795 1136 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 GTF2A2P52657 109 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 RPL11P62913 178 aaKnown RBP9.83□□□□□ -0.84
SMC5-203ENST00000475540 SSRP1Q08945 709 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms