RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 GLI1P08151 1106 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 INPP5BP32019 993 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 ARID5AQ03989 594 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 TXNRD1Q16881 649 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 MMS22LQ6ZRQ5 1243 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 DYNLL2Q96FJ2 89 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 BACH1O14867 736 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 HNRNPH1P31943 449 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 RCAN1P53805 252 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 LRRC41Q15345 812 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 LETM2Q2VYF4 491 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 GLIS3Q8NEA6 775 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
SEMA4D-217ENST00000475255 UBR2Q8IWV8 1755 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 FTCDO95954 541 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 SLC35G1Q2M3R5 365 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 C8orf74Q6P047 294 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 SH2D4AQ9H788 454 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 ADAMTSL3P82987 1691 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 LRRC53A6NM62 1247 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 USP17L8P0C7I0 530 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 TECP42680 631 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 SLC1A4P43007 532 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 GUCY2DQ02846 1103 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 NNTQ13423 1086 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 SEMA6BQ9H3T3 888 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
SEMA4D-217ENST00000475255 HSF2BPO75031 334 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 MAGEA1P43355 309 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 TANGO6Q9C0B7 1094 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 EPB41L5Q9HCM4 733 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 STIM2Q9P246 746 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 SLIT2O94813 1529 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 ANO9A1A5B4 782 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 USO1O60763 962 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CCNE1P24864 410 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 TDRD12Q587J7 1177 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 RNF187Q5TA31 235 aaPredicted RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CABP7Q86V35 215 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CARD10Q9BWT7 1032 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 TRIM9Q9C026 710 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 GOLPH3Q9H4A6 298 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 VAT1LQ9HCJ6 419 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 DDAH1O94760 285 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 COL1A1P02452 1464 aaPredicted RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CALM1P0DP23 149 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CALM2P0DP24 149 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CALM3P0DP25 149 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 HPDP32754 393 aaPredicted RBP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 MMGT1Q8N4V1 131 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 KIAA0895Q8NCT3 520 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
SEMA4D-217ENST00000475255 PRDX5P30044 214 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 TFAP4Q01664 338 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 TLR10Q9BXR5 811 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 CCNT1O60563 726 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 TRAPPC10P48553 1259 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 IQCEQ6IPM2 695 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 SLC51AQ86UW1 340 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 SH3GL2Q99962 352 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 PCDHA4Q9UN74 947 aa15.22■□□□□ 0.03
SEMA4D-217ENST00000475255 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 MCTP2Q6DN12 878 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 MTA3Q9BTC8 594 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 COL4A1P02462 1669 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms