RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 PGK1P00558 417 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ADCYAP1R1P41586 468 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 PSEN1P49768 467 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 BAATQ14032 418 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 CLEC4DQ8WXI8 215 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 MTA3Q9BTC8 594 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ZMYND8Q9ULU4 1186 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOB-208ENST00000475235 ABCB11O95342 1321 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 SYNRGQ9UMZ2 1314 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 A0A1W2PPC1 479 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 WTAPQ15007 396 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 SNX17Q15036 470 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 SLC39A5Q6ZMH5 540 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 MORC4Q8TE76 937 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 CPVLQ9H3G5 476 aa13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
HLA-DOB-208ENST00000475235 B4DLN1 442 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 SLC34A2O95436 690 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 CALML3P27482 149 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 RTP1P59025 263 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 SLC20A2Q08357 652 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 USH1GQ495M9 461 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 STOX1Q6ZVD7 989 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 MCF2L2Q86YR7 1114 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 MB21D2Q8IYB1 491 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 PCSK9Q8NBP7 692 aaKnown RBP13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 DNERQ8NFT8 737 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 LENG1Q96BZ8 264 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 VTA1Q9NP79 307 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 PRKAG2Q9UGJ0 569 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
HLA-DOB-208ENST00000475235 ASTN1O14525 1302 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 CDC45O75419 566 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 C6orf222P0C671 652 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 SYN1P17600 705 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 BMP8BP34820 402 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 ALDH5A1P51649 535 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 GJA9P57773 515 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 TNFAIP2Q03169 654 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 TRAF1Q13077 416 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 POTEHQ6S545 545 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 SLC30A10Q6XR72 485 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 FBXO11Q86XK2 927 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 KLHDC9Q8NEP7 349 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 GDF15Q99988 308 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
HLA-DOB-208ENST00000475235 A0A1W2PQ45 241 aaPredicted RBP13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 A0A1W2PQY0 241 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 SLC27A2O14975 620 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 MCM5P33992 734 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 ACLYP53396 1101 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 NKX3-2P78367 333 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 TROAPQ12815 778 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 GRM4Q14833 912 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 NECTIN1Q15223 517 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 VAT1LQ9HCJ6 419 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 STARD7Q9NQZ5 370 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
HLA-DOB-208ENST00000475235 ZBTB5O15062 677 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 ANTXR2P58335 489 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 KCNA10Q16322 511 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms