RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 RBBP8NLQ8NC74 664 aaPredicted RBP1.69□□□□□ -2.14
HDAC9-222ENST00000474742 GPRASP2Q96D09 838 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 SLC6A18Q96N87 628 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 SAMD11Q96NU1 681 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 JMJD8Q96S16 334 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 CDK5RAP1Q96SZ6 601 aaKnown RBP1.69□□□□□ -2.14
HDAC9-222ENST00000474742 DSCC1Q9BVC3 393 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF341Q9BYN7 854 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 LNPKQ9C0E8 428 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 PRDM14Q9GZV8 571 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 MKRN2Q9H000 416 aaKnown RBP1.69□□□□□ -2.14
HDAC9-222ENST00000474742 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.69□□□□□ -2.14
HDAC9-222ENST00000474742 DEF6Q9H4E7 631 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 JADE2Q9NQC1 790 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 CHST7Q9NS84 486 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 ST6GALNAC2Q9UJ37 374 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 ACSL6Q9UKU0 697 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 EFR3BQ9Y2G0 817 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 HS3ST3A1Q9Y663 406 aa1.69□□□□□ -2.14
HDAC9-222ENST00000474742 A0A1W2PQH9 124 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 SH3D21A4FU49 640 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 C1QTNF3-AMACRE9PGA6 284 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 CBFA2T2O43439 604 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 SIGLEC6O43699 453 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 CLEC3AO75596 197 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PLATP00750 562 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 AMHP03971 560 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PLA2G1BP04054 148 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 CYBBP04839 570 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 GSTM1P09488 218 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TCF3P15923 654 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 ATF4P18848 351 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 IGFBP6P24592 240 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 GIPRP48546 466 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 NASPP49321 788 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 RBM25P49756 843 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TGFB2P61812 414 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PRR5P85299 388 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 BBS9Q3SYG4 887 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 VWA3BQ502W6 1294 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 AXDND1Q5T1B0 1012 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TDRD10Q5VZ19 366 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 HLA-DQA1Q5Y7H0 255 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 DCAF15Q66K64 600 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 INTS3Q68E01 1043 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PAQR3Q6TCH7 311 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 SLCO6A1Q86UG4 719 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 CABP7Q86V35 215 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PALM2Q8IXS6 379 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TAB3Q8N5C8 712 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TMEM52Q8NDY8 209 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 KLHL6Q8WZ60 621 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 ZBTB8AQ96BR9 441 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TINF2Q9BSI4 451 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TGIF2Q9GZN2 237 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 RNF38Q9H0F5 515 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 TNFRSF12AQ9NP84 129 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 AP5S1Q9NUS5 200 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 SUCOQ9UBS9 1254 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 PCDHB10Q9UN67 800 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 INVSQ9Y283 1065 aa1.68□□□□□ -2.14
HDAC9-222ENST00000474742 CCDC9Q9Y3X0 531 aaKnown RBP1.68□□□□□ -2.14
HDAC9-222ENST00000474742 IRS2Q9Y4H2 1338 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 NPEPPSL1A6NEC2 478 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 PPFIA2O75334 1257 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 TP53P04637 393 aaPredicted RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ATF2P15336 505 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 VAV1P15498 845 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 GUCY2CP25092 1073 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ERCC5P28715 1186 aaPredicted RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ETFBP38117 255 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ITGAEP38570 1179 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 CCNFP41002 786 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MC3RP41968 323 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 PMS1P54277 932 aaKnown RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF445P59923 1031 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MVKQ03426 396 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 CYP4F3Q08477 520 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 SMAD4Q13485 552 aaKnown RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 AUHQ13825 339 aaKnown RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 FHL2Q14192 279 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 RGL3Q3MIN7 710 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 TBC1D10BQ4KMP7 808 aaPredicted RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 RTP2Q5QGT7 225 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 NOL9Q5SY16 702 aaKnown RBP1.67□□□□□ -2.14
HDAC9-222ENST00000474742 LIMS2Q7Z4I7 341 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 B3GNT8Q7Z7M8 397 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MCF2L2Q86YR7 1114 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 SMARCC2Q8TAQ2 1214 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MICAL1Q8TDZ2 1067 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 USP33Q8TEY7 942 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 FERD3LQ96RJ6 166 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 TM9SF2Q99805 663 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 MCMBPQ9BTE3 642 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ZNF747Q9BV97 191 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 LGR4Q9BXB1 951 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 PDLIM7Q9NR12 457 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 FAM86C1Q9NVL1 165 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 ERVK13-1Q9NX77 482 aa1.67□□□□□ -2.14
HDAC9-222ENST00000474742 GFOD1Q9NXC2 390 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms