RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 TOMM22Q9NS69 142 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SLC5A4Q9NY91 659 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 ANAPC4Q9UJX5 808 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FEM1BQ9UK73 627 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 PRR12Q9ULL5 1215 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SYNPO2Q9UMS6 1093 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 DIS3Q9Y2L1 958 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SOWAHBA6NEL2 793 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 TRIM6-TRIM34B2RNG4 842 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 CTAGE5O15320 804 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ZBED4O75132 1171 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ALAS1P13196 640 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
CPSF7-210ENST00000474684 OAZ1P54368 228 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 EPHB4P54760 987 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 IRX6P78412 446 aaPredicted RBP7□□□□□ -1.29
CPSF7-210ENST00000474684 TLE2Q04725 743 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 IKQ13123 557 aaPredicted RBP7□□□□□ -1.29
CPSF7-210ENST00000474684 DSG2Q14126 1118 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ALX1Q15699 326 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 LRIT3Q3SXY7 679 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 MCMDC2Q4G0Z9 681 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 CCSAPQ6IQ19 270 aaPredicted RBP7□□□□□ -1.29
CPSF7-210ENST00000474684 MAMDC4Q6UXC1 1216 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 SLC30A10Q6XR72 485 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 CHD1LQ86WJ1 897 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 FBXO16Q8IX29 292 aaPredicted RBP7□□□□□ -1.29
CPSF7-210ENST00000474684 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ANKRD35Q8N283 1001 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ARRDC4Q8NCT1 418 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 OXER1Q8TDS5 423 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 BADQ92934 168 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 RILPL2Q969X0 211 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 DDX11Q96FC9 970 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 TMEM47Q9BQJ4 181 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ZKSCAN3Q9BRR0 538 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ACAD9Q9H845 621 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 ZNF287Q9HBT7 754 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 NRBP1Q9UHY1 535 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 CNPY2Q9Y2B0 182 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 CHD9Q3L8U1 2897 aa7□□□□□ -1.29
CPSF7-210ENST00000474684 A0A0C4DFX4 3053 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 PRRC2BQ5JSZ5 2229 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 NLRC5Q86WI3 1866 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 NFIBO00712 420 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 PQBP1O60828 265 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 PPP1R37O75864 691 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 SLC3A2P08195 630 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 PDHBP11177 359 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 SDSP20132 328 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 ACLYP53396 1101 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 BEX3Q00994 111 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 NUCB1Q02818 461 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 ACVR2BQ13705 512 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 SHHQ15465 462 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 CCDC144BQ3MJ40 725 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 NSMFQ6X4W1 530 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 EEPD1Q7L9B9 569 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 FAM160B2Q86V87 743 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 KLHDC9Q8NEP7 349 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 CHST13Q8NET6 341 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 STAG1Q8WVM7 1258 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 UPF3AQ9H1J1 476 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 RANBP17Q9H2T7 1088 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 PDGFCQ9NRA1 345 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 CCPG1Q9ULG6 757 aa6.99□□□□□ -1.29
CPSF7-210ENST00000474684 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 TCF20Q9UGU0 1960 aaKnown RBP6.99□□□□□ -1.29
CPSF7-210ENST00000474684 REV3LO60673 3130 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 VCANP13611 3396 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 GFRA3O60609 400 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 CLTBP09497 229 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 GOLGA8HP0CJ92 632 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 SNHG28P0DPA3 235 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 TOP1P11387 765 aaKnown RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 CST5P28325 142 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 AKNAD1Q5T1N1 836 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 SYDE2Q5VT97 1194 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 C1orf53Q5VUE5 145 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 CWC27Q6UX04 472 aaKnown RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 RNF180Q86T96 592 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 MSL3Q8N5Y2 521 aaKnown RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 DEFB123Q8N688 67 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 DCAF4Q8WV16 495 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 TRERF1Q96PN7 1200 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 LBHD1Q9BQE6 289 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-210ENST00000474684 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 STARD7Q9NQZ5 370 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 CYP39A1Q9NYL5 469 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 FBXO40Q9UH90 709 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 RABGEF1Q9UJ41 708 aa6.98□□□□□ -1.29
CPSF7-210ENST00000474684 TBX21Q9UL17 535 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms