RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 KIAA1211Q6ZU35 1233 aa23.94■■□□□ 1.42
APP-215ENST00000474136 RASGRP2Q7LDG7 609 aa23.94■■□□□ 1.42
APP-215ENST00000474136 FAM160B2Q86V87 743 aa23.94■■□□□ 1.42
APP-215ENST00000474136 CHURC1Q8WUH1 139 aa23.94■■□□□ 1.42
APP-215ENST00000474136 LRRCC1Q9C099 1032 aa23.94■■□□□ 1.42
APP-215ENST00000474136 ZNF287Q9HBT7 754 aa23.94■■□□□ 1.42
APP-215ENST00000474136 CYP39A1Q9NYL5 469 aa23.94■■□□□ 1.42
APP-215ENST00000474136 Q9Y3F1 56 aa23.94■■□□□ 1.42
APP-215ENST00000474136 LRRC37A2A6NM11 1700 aa23.94■■□□□ 1.42
APP-215ENST00000474136 RNF113AO15541 343 aaKnown RBP23.93■■□□□ 1.42
APP-215ENST00000474136 IGHDP01880 384 aa23.93■■□□□ 1.42
APP-215ENST00000474136 SLC1A4P43007 532 aa23.93■■□□□ 1.42
APP-215ENST00000474136 TSHZ3Q63HK5 1081 aa23.93■■□□□ 1.42
APP-215ENST00000474136 KCTD1Q719H9 257 aa23.93■■□□□ 1.42
APP-215ENST00000474136 PPP1R13LQ8WUF5 828 aa23.93■■□□□ 1.42
APP-215ENST00000474136 GMCL1Q96IK5 515 aa23.93■■□□□ 1.42
APP-215ENST00000474136 ECHDC1Q9NTX5 307 aa23.93■■□□□ 1.42
APP-215ENST00000474136 PLIN4Q96Q06 1357 aa23.93■■□□□ 1.42
APP-215ENST00000474136 TNKSO95271 1327 aa23.93■■□□□ 1.42
APP-215ENST00000474136 GTPBP6O43824 516 aaPredicted RBP23.92■■□□□ 1.42
APP-215ENST00000474136 POU3F3P20264 500 aaPredicted RBP23.92■■□□□ 1.42
APP-215ENST00000474136 TFAP4Q01664 338 aa23.92■■□□□ 1.42
APP-215ENST00000474136 NSMFQ6X4W1 530 aa23.92■■□□□ 1.42
APP-215ENST00000474136 IFNL3Q8IZI9 196 aa23.92■■□□□ 1.42
APP-215ENST00000474136 LRFN3Q9BTN0 628 aa23.92■■□□□ 1.42
APP-215ENST00000474136 DCTPP1Q9H773 170 aa23.92■■□□□ 1.42
APP-215ENST00000474136 VTA1Q9NP79 307 aa23.92■■□□□ 1.42
APP-215ENST00000474136 PFKMP08237 780 aa23.91■■□□□ 1.42
APP-215ENST00000474136 HOXD11P31277 338 aaPredicted RBP23.91■■□□□ 1.42
APP-215ENST00000474136 SMC5Q8IY18 1101 aa23.91■■□□□ 1.42
APP-215ENST00000474136 TRANK1O15050 2925 aa23.91■■□□□ 1.42
APP-215ENST00000474136 MYL3P08590 195 aa23.9■■□□□ 1.42
APP-215ENST00000474136 GNAT2P19087 354 aa23.9■■□□□ 1.42
APP-215ENST00000474136 MORC4Q8TE76 937 aa23.9■■□□□ 1.42
APP-215ENST00000474136 ARNTL2Q8WYA1 636 aa23.9■■□□□ 1.42
APP-215ENST00000474136 PRR12Q9ULL5 1215 aa23.9■■□□□ 1.42
APP-215ENST00000474136 PATL2C9JE40 543 aaKnown RBP23.89■■□□□ 1.42
APP-215ENST00000474136 TLL1O43897 1013 aa23.89■■□□□ 1.42
APP-215ENST00000474136 SUPT20HL2P0C7V6 817 aa23.89■■□□□ 1.42
APP-215ENST00000474136 PURAQ00577 322 aaKnown RBP23.89■■□□□ 1.42
APP-215ENST00000474136 TAP1Q03518 808 aa23.89■■□□□ 1.42
APP-215ENST00000474136 DUSP28Q4G0W2 176 aa23.89■■□□□ 1.42
APP-215ENST00000474136 SPRED2Q7Z698 418 aa23.89■■□□□ 1.42
APP-215ENST00000474136 ZBTB47Q9UFB7 747 aaPredicted RBP23.89■■□□□ 1.42
APP-215ENST00000474136 CCPG1Q9ULG6 757 aa23.89■■□□□ 1.42
APP-215ENST00000474136 PLA2G6O60733 806 aa23.88■■□□□ 1.41
APP-215ENST00000474136 PDE4BQ07343 736 aa23.88■■□□□ 1.41
APP-215ENST00000474136 RCSD1Q6JBY9 416 aa23.88■■□□□ 1.41
APP-215ENST00000474136 SEC62Q99442 399 aaKnown RBP23.88■■□□□ 1.41
APP-215ENST00000474136 WDR11Q9BZH6 1224 aa23.88■■□□□ 1.41
APP-215ENST00000474136 POLR3EQ9NVU0 708 aa23.88■■□□□ 1.41
APP-215ENST00000474136 MTMR7Q9Y216 660 aa23.88■■□□□ 1.41
APP-215ENST00000474136 BAATQ14032 418 aaPredicted RBP23.87■■□□□ 1.41
APP-215ENST00000474136 FAM47CQ5HY64 1035 aa23.87■■□□□ 1.41
APP-215ENST00000474136 KHSRPQ92945 711 aaKnown RBP eCLIP23.87■■□□□ 1.41
APP-215ENST00000474136 SLC9A7Q96T83 725 aa23.87■■□□□ 1.41
APP-215ENST00000474136 STX8Q9UNK0 236 aa23.87■■□□□ 1.41
APP-215ENST00000474136 COG5Q9UP83 839 aa23.87■■□□□ 1.41
APP-215ENST00000474136 SCN5AQ14524 2016 aa23.87■■□□□ 1.41
APP-215ENST00000474136 NMT2O60551 498 aa23.86■■□□□ 1.41
APP-215ENST00000474136 ZFYP08048 801 aaPredicted RBP23.86■■□□□ 1.41
APP-215ENST00000474136 ACTN1P12814 892 aa23.86■■□□□ 1.41
APP-215ENST00000474136 ALDH5A1P51649 535 aaPredicted RBP23.86■■□□□ 1.41
APP-215ENST00000474136 PPARAQ07869 468 aa23.86■■□□□ 1.41
APP-215ENST00000474136 NBPF20Q3BBV1 942 aa23.86■■□□□ 1.41
APP-215ENST00000474136 MTG1Q9BT17 334 aaPredicted RBP23.86■■□□□ 1.41
APP-215ENST00000474136 INCENPQ9NQS7 918 aa23.86■■□□□ 1.41
APP-215ENST00000474136 LCTP09848 1927 aa23.86■■□□□ 1.41
APP-215ENST00000474136 GRB10Q13322 594 aa23.85■■□□□ 1.41
APP-215ENST00000474136 HERC6Q8IVU3 1022 aa23.85■■□□□ 1.41
APP-215ENST00000474136 OR6J1Q8NGC5 347 aa23.85■■□□□ 1.41
APP-215ENST00000474136 FTOQ9C0B1 505 aaKnown RBP eCLIP23.85■■□□□ 1.414e-6■□□□□ 10.1
APP-215ENST00000474136 IL17RBQ9NRM6 502 aa23.85■■□□□ 1.41
APP-215ENST00000474136 NFIBO00712 420 aa23.84■■□□□ 1.41
APP-215ENST00000474136 IQCF3P0C7M6 154 aa23.84■■□□□ 1.41
APP-215ENST00000474136 CPT1AP50416 773 aa23.84■■□□□ 1.41
APP-215ENST00000474136 TMEM31Q5JXX7 168 aa23.84■■□□□ 1.41
APP-215ENST00000474136 TTBK2Q6IQ55 1244 aa23.84■■□□□ 1.41
APP-215ENST00000474136 PHOSPHO2Q8TCD6 241 aa23.84■■□□□ 1.41
APP-215ENST00000474136 HLA-CQ95604 372 aa23.84■■□□□ 1.41
APP-215ENST00000474136 NACAP1Q9BZK3 213 aa23.84■■□□□ 1.41
APP-215ENST00000474136 NAPBQ9H115 298 aa23.84■■□□□ 1.41
APP-215ENST00000474136 GPHNQ9NQX3 736 aaPredicted RBP23.84■■□□□ 1.41
APP-215ENST00000474136 HCN4Q9Y3Q4 1203 aa23.84■■□□□ 1.41
APP-215ENST00000474136 RBM47A0AV96 593 aaKnown RBP23.84■■□□□ 1.41
APP-215ENST00000474136 LPXNO60711 386 aa23.84■■□□□ 1.41
APP-215ENST00000474136 ICAM1P05362 532 aa23.84■■□□□ 1.41
APP-215ENST00000474136 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
APP-215ENST00000474136 RFC2P35250 354 aa23.84■■□□□ 1.41
APP-215ENST00000474136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.84■■□□□ 1.41
APP-215ENST00000474136 FAM86C2PA6NEL3 165 aa23.83■■□□□ 1.4
APP-215ENST00000474136 SLC16A2P36021 539 aa23.83■■□□□ 1.4
APP-215ENST00000474136 CCDC96Q2M329 555 aa23.83■■□□□ 1.4
APP-215ENST00000474136 RETREG2Q8NC44 543 aa23.83■■□□□ 1.4
APP-215ENST00000474136 COPS5Q92905 334 aa23.83■■□□□ 1.4
APP-215ENST00000474136 C11orf16Q9NQ32 467 aa23.83■■□□□ 1.4
APP-215ENST00000474136 ADD3Q9UEY8 706 aaKnown RBP23.83■■□□□ 1.4
APP-215ENST00000474136 TSPY2A6NKD2 308 aa23.82■■□□□ 1.4
APP-215ENST00000474136 KIF28PB7ZC32 967 aa23.82■■□□□ 1.4
APP-215ENST00000474136 RBAK-RBAKDNI3L0D1 243 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms