RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 TMEM52Q8NDY8 209 aa7.52□□□□□ -1.21
SEMA3A-206ENST00000471474 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
SEMA3A-206ENST00000471474 NUDT5Q9UKK9 219 aa7.52□□□□□ -1.21
SEMA3A-206ENST00000471474 ACSL6Q9UKU0 697 aa7.52□□□□□ -1.21
SEMA3A-206ENST00000471474 RWDD3Q9Y3V2 267 aa7.52□□□□□ -1.21
SEMA3A-206ENST00000471474 A0A1W2PQU0 124 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 PRODHO43272 600 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 SDHBP21912 280 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 RPL11P62913 178 aaKnown RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 KCNAB2Q13303 367 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 RASGRF1Q13972 1273 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 NR1I3Q14994 352 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 E4F1Q66K89 784 aaPredicted RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 NSMFQ6X4W1 530 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 ZNF513Q8N8E2 541 aaPredicted RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 COPS5Q92905 334 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 MRFAP1L1Q96HT8 127 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 DEPDC7Q96QD5 511 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 GULP1Q9UBP9 304 aa7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
SEMA3A-206ENST00000471474 TBX1O43435 398 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 FUCA1P04066 466 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 GTF2A2P52657 109 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 USP53Q70EK8 1073 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 MMP19Q99542 508 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 OSBPL2Q9H1P3 480 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 SP110Q9HB58 689 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 COA3Q9Y2R0 106 aaPredicted RBP7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
SEMA3A-206ENST00000471474 TCAF2A6NFQ2 919 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 F8W031 263 aaPredicted RBP7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 MVKQ03426 396 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 ZNF648Q5T619 568 aaPredicted RBP7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 TMEM145Q8NBT3 493 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 TRMT2BQ96GJ1 504 aaKnown RBP7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.49□□□□□ -1.21
SEMA3A-206ENST00000471474 C7orf72A4D263 438 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 LTBRP36941 435 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 GFRA1P56159 465 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 PRSS53Q2L4Q9 553 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 ZC3H14Q6PJT7 736 aaKnown RBP7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 PAQR3Q6TCH7 311 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 NLGN2Q8NFZ4 835 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 FMNL2Q96PY5 1086 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 AP5M1Q9H0R1 490 aa7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 ZNF552Q9H707 407 aaPredicted RBP7.48□□□□□ -1.21
SEMA3A-206ENST00000471474 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 CYBBP04839 570 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 PABPC1P11940 636 aaKnown RBP7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 ERVFRD-1P60508 538 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 MAP4K2Q12851 820 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 BMS1Q14692 1282 aaKnown RBP7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 SF1Q15637 639 aaKnown RBP7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 SPATC1Q76KD6 591 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 FRS2Q8WU20 508 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 MKL1Q969V6 931 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 TMEM169Q96HH4 297 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 SNTG2Q9NY99 539 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 PCDHA2Q9Y5H9 948 aa7.47□□□□□ -1.21
SEMA3A-206ENST00000471474 C22orf46C9J442 243 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 PEX10O60683 326 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 SCG5P05408 212 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 FGFR1P11362 822 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 GRIA2P42262 883 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 CEP68Q76N32 757 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 PEX11GQ96HA9 241 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 MSRB2Q9Y3D2 182 aa7.46□□□□□ -1.22
SEMA3A-206ENST00000471474 SEMA7AO75326 666 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 MSL3P1P0C860 447 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 LSAMPQ13449 338 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 ACBD5Q5T8D3 534 aaPredicted RBP7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 SCUBE1Q8IWY4 988 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
SEMA3A-206ENST00000471474 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 TEX51A0A1B0GUA7 166 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 ZC3H12DA2A288 527 aaKnown RBP7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 HRKO00198 91 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 DBHP09172 617 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 PFKLP17858 780 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 VIPR1P32241 457 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 RPTNQ6XPR3 784 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 ATG14Q6ZNE5 492 aa7.44□□□□□ -1.22
SEMA3A-206ENST00000471474 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms