RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 STK36Q9NRP7 1315 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 KRT2P35908 639 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 IFFO1Q0D2I5 559 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 GLE1Q53GS7 698 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 TDRD12Q587J7 1177 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 TTC38Q5R3I4 469 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 NOC4LQ9BVI4 516 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 MMRN2Q9H8L6 949 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 GPR108Q9NPR9 543 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 RMND1Q9NWS8 449 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 NOVA2Q9UNW9 492 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF532Q9HCE3 1301 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 PSMA7O14818 248 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 KIF4AO95239 1232 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 ELF3P78545 371 aaPredicted RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 MEA1Q16626 185 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 FAM133BQ5BKY9 247 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 CAPRIN2Q6IMN6 1127 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 PPP4R3AQ6IN85 833 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 SGMS1Q86VZ5 419 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 CCDC63Q8NA47 563 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 CUL5Q93034 780 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 FERMT2Q96AC1 680 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 AHDC1Q5TGY3 1603 aaPredicted RBP10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
NHLRC3-203ENST00000470258 A0A1W2PQC6 194 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 UPP2O95045 317 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MYBL1P10243 752 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 DDX42Q86XP3 938 aaKnown RBP eCLIP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 RAPGEF5Q92565 580 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 CWC25Q9NXE8 425 aaPredicted RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 CPSF2Q9P2I0 782 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 IRF6O14896 467 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 TRAPPC3O43617 180 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 ANP32DO95626 131 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 EEF1GP26641 437 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 SPDYE1Q8NFV5 336 aaPredicted RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MDM1Q8TC05 714 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF507Q8TCN5 953 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 FBXO41Q8TF61 875 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 SPAG5Q96R06 1193 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 TLR10Q9BXR5 811 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 C4BP0C0L5 1744 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 NWD2Q9ULI1 1742 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 RRAGAQ7L523 313 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 CNOT6LQ96LI5 555 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 SH3GL3Q99963 347 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 TMBIM4Q9HC24 238 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 SALL4Q9UJQ4 1053 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 HEG1Q9ULI3 1381 aa10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 MED1Q15648 1581 aaPredicted RBP10.53□□□□□ -0.72
NHLRC3-203ENST00000470258 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 DIAPH2O60879 1101 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 SRGNP10124 158 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 HSD17B3P37058 310 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 LIFRP42702 1097 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 MCAMP43121 646 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 CASP7P55210 303 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 GFPT1Q06210 699 aaPredicted RBP10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 GRIK3Q13003 919 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 KRT71Q3SY84 523 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 TMED8Q6PL24 325 aaPredicted RBP10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 PIK3AP1Q6ZUJ8 805 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 FANCBQ8NB91 859 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 RUBCNQ92622 972 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 HOOK2Q96ED9 719 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 MTMR8Q96EF0 704 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 NOX5Q96PH1 765 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 PLCD4Q9BRC7 762 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 NUP58Q9BVL2 599 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 ARHGAP20Q9P2F6 1191 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 GGT7Q9UJ14 662 aa10.52□□□□□ -0.72
NHLRC3-203ENST00000470258 PHLPP1O60346 1717 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 PIK3C2AO00443 1686 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 SMIM23A6NLE4 172 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 RAD51CO43502 376 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 ADD2P35612 726 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 SLC8A3P57103 927 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 ITIH3Q06033 890 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 EHHADHQ08426 723 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 XRCC4Q13426 336 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 SNX1Q13596 522 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 CDC37Q16543 378 aaPredicted RBP10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
NHLRC3-203ENST00000470258 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms