RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
TTC28-205ENST00000469670 PLA2G6O60733 806 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 MCCP23508 829 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 RFC2P35250 354 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 SNAP25P60880 206 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 PURAQ00577 322 aaKnown RBP21.68■■□□□ 1.06
TTC28-205ENST00000469670 TFAP4Q01664 338 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 TAP1Q03518 808 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 NSMFQ6X4W1 530 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 HLA-CQ95604 372 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 PURBQ96QR8 312 aaKnown RBP21.68■■□□□ 1.06
TTC28-205ENST00000469670 ECHDC1Q9NTX5 307 aa21.68■■□□□ 1.06
TTC28-205ENST00000469670 PRRC2BQ5JSZ5 2229 aaKnown RBP21.67■■□□□ 1.06
TTC28-205ENST00000469670 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
TTC28-205ENST00000469670 ARHGEF15O94989 841 aa21.67■■□□□ 1.06
TTC28-205ENST00000469670 MYL3P08590 195 aa21.67■■□□□ 1.06
TTC28-205ENST00000469670 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
TTC28-205ENST00000469670 PDE4BQ07343 736 aa21.67■■□□□ 1.06
TTC28-205ENST00000469670 KCTD1Q719H9 257 aa21.67■■□□□ 1.06
TTC28-205ENST00000469670 PRR12Q9ULL5 1215 aa21.67■■□□□ 1.06
TTC28-205ENST00000469670 TRANK1O15050 2925 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 PATL2C9JE40 543 aaKnown RBP21.66■■□□□ 1.06
TTC28-205ENST00000469670 M0R2C6 588 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 CPT1AP50416 773 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 FAM47CQ5HY64 1035 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 HERC6Q8IVU3 1022 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 IFNL3Q8IZI9 196 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 MTG1Q9BT17 334 aaPredicted RBP21.66■■□□□ 1.06
TTC28-205ENST00000469670 WDR11Q9BZH6 1224 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 GPHNQ9NQX3 736 aaPredicted RBP21.66■■□□□ 1.06
TTC28-205ENST00000469670 CCPG1Q9ULG6 757 aa21.66■■□□□ 1.06
TTC28-205ENST00000469670 ZFYP08048 801 aaPredicted RBP21.65■■□□□ 1.06
TTC28-205ENST00000469670 GRB10Q13322 594 aa21.65■■□□□ 1.06
TTC28-205ENST00000469670 RCSD1Q6JBY9 416 aa21.65■■□□□ 1.06
TTC28-205ENST00000469670 RETREG2Q8NC44 543 aa21.65■■□□□ 1.06
TTC28-205ENST00000469670 FTOQ9C0B1 505 aaKnown RBP eCLIP21.65■■□□□ 1.06
TTC28-205ENST00000469670 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.05
TTC28-205ENST00000469670 IQCF3P0C7M6 154 aa21.64■■□□□ 1.05
TTC28-205ENST00000469670 NBPF20Q3BBV1 942 aa21.64■■□□□ 1.05
TTC28-205ENST00000469670 OR6J1Q8NGC5 347 aa21.64■■□□□ 1.05
TTC28-205ENST00000469670 KHSRPQ92945 711 aaKnown RBP eCLIP21.64■■□□□ 1.05
TTC28-205ENST00000469670 NACAP1Q9BZK3 213 aa21.64■■□□□ 1.05
TTC28-205ENST00000469670 ADD3Q9UEY8 706 aaKnown RBP21.64■■□□□ 1.05
TTC28-205ENST00000469670 STX8Q9UNK0 236 aa21.64■■□□□ 1.05
TTC28-205ENST00000469670 PITPNM1O00562 1244 aa21.63■■□□□ 1.05
TTC28-205ENST00000469670 GPR37L1O60883 481 aa21.63■■□□□ 1.05
TTC28-205ENST00000469670 ALDH5A1P51649 535 aaPredicted RBP21.63■■□□□ 1.05
TTC28-205ENST00000469670 BAATQ14032 418 aaPredicted RBP21.63■■□□□ 1.05
TTC28-205ENST00000469670 PPP4R3BQ5MIZ7 849 aa21.63■■□□□ 1.05
TTC28-205ENST00000469670 RBM47A0AV96 593 aaKnown RBP21.62■■□□□ 1.05
TTC28-205ENST00000469670 LPXNO60711 386 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 ICAM1P05362 532 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 PPARAQ07869 468 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 BRDTQ58F21 947 aaPredicted RBP21.62■■□□□ 1.05
TTC28-205ENST00000469670 NFRKBQ6P4R8 1299 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 RASGRP2Q7LDG7 609 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 PPP1R13LQ8WUF5 828 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 CHMP4BQ9H444 224 aaKnown RBP21.62■■□□□ 1.05
TTC28-205ENST00000469670 C11orf16Q9NQ32 467 aa21.62■■□□□ 1.05
TTC28-205ENST00000469670 LOC102724159A0A0B4J2E5 919 aa21.61■■□□□ 1.05
TTC28-205ENST00000469670 BAIAP3O94812 1187 aa21.61■■□□□ 1.05
TTC28-205ENST00000469670 BFSP2Q13515 415 aa21.61■■□□□ 1.05
TTC28-205ENST00000469670 PWP2Q15269 919 aaKnown RBP21.61■■□□□ 1.05
TTC28-205ENST00000469670 SPRED2Q7Z698 418 aa21.61■■□□□ 1.05
TTC28-205ENST00000469670 NAPBQ9H115 298 aa21.61■■□□□ 1.05
TTC28-205ENST00000469670 FAM86C2PA6NEL3 165 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 PTPN11Q06124 597 aaPredicted RBP21.6■■□□□ 1.05
TTC28-205ENST00000469670 TSHZ3Q63HK5 1081 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 RANBP17Q9H2T7 1088 aaKnown RBP21.6■■□□□ 1.05
TTC28-205ENST00000469670 IL17RBQ9NRM6 502 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 MTMR7Q9Y216 660 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 SCN5AQ14524 2016 aa21.6■■□□□ 1.05
TTC28-205ENST00000469670 RAD50Q92878 1312 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 PTPDC1A2A3K4 754 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 TSPY2A6NKD2 308 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 NFIBO00712 420 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 KPNA6O60684 536 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 KCNJ6P48051 423 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 PPP2R5BQ15173 497 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 CCDC96Q2M329 555 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 LRRFIP1Q32MZ4 808 aaKnown RBP21.59■■□□□ 1.05
TTC28-205ENST00000469670 SEC62Q99442 399 aaKnown RBP21.59■■□□□ 1.05
TTC28-205ENST00000469670 NOD1Q9Y239 953 aa21.59■■□□□ 1.05
TTC28-205ENST00000469670 A6NJR5 290 aa21.58■■□□□ 1.05
TTC28-205ENST00000469670 PI4K2BG5E9Z4 385 aa21.58■■□□□ 1.05
TTC28-205ENST00000469670 NKRFO15226 690 aaKnown RBP eCLIP21.58■■□□□ 1.05
TTC28-205ENST00000469670 NMT2O60551 498 aa21.58■■□□□ 1.05
TTC28-205ENST00000469670 CD320Q9NPF0 282 aa21.58■■□□□ 1.05
TTC28-205ENST00000469670 LMCD1Q9NZU5 365 aa21.58■■□□□ 1.05
TTC28-205ENST00000469670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.58■■□□□ 1.05
TTC28-205ENST00000469670 LCTP09848 1927 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 LCHNA4D1U4 455 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 CALML3P27482 149 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 SLC16A2P36021 539 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 TTBK2Q6IQ55 1244 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 SLC30A10Q6XR72 485 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 GDPD5Q8WTR4 605 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms