RNA–Protein interactions for RNA: ENST00000469380.1

CSF3R-209, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-209ENST00000469380 DEFB129Q9H1M3 183 aa13.16□□□□□ -0.3
CSF3R-209ENST00000469380 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
CSF3R-209ENST00000469380 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
CSF3R-209ENST00000469380 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
CSF3R-209ENST00000469380 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 TBX3O15119 743 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 TDP2O95551 362 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 CYP3A4P08684 503 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 ZNF18P17022 549 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 CIITAP33076 1130 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 GSDMDP57764 484 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 FANCCQ00597 558 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 RASSF7Q02833 373 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 CUL4BQ13620 913 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 USP17L6PQ6QN14 398 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
CSF3R-209ENST00000469380 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 LRWD1Q9UFC0 647 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
CSF3R-209ENST00000469380 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 SLC37A4O43826 429 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 LMNB1P20700 586 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 LMOD1P29536 600 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 CDC25AP30304 524 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 SREBF1P36956 1147 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 TECP42680 631 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 TXKP42681 527 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 Q4G0T1 1027 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 FAM83BQ5T0W9 1011 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 SPATA1Q5VX52 437 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 GPC2Q8N158 579 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 MMTAG2Q9BU76 263 aaKnown RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 LRRC27Q9C0I9 530 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 KCNMB3Q9NPA1 279 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 HACL1Q9UJ83 578 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 MRPL11Q9Y3B7 192 aaKnown RBP13.14□□□□□ -0.31
CSF3R-209ENST00000469380 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
CSF3R-209ENST00000469380 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 RHOBTB3O94955 611 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 EGFRP00533 1210 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 FDX1P10109 184 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 PLCG1P19174 1290 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 PPP1R2P41236 205 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 FMR1Q06787 632 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSF3R-209ENST00000469380 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-209ENST00000469380 HYIQ5T013 277 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 KRT79Q5XKE5 535 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 HAS1Q92839 578 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 ZNF341Q9BYN7 854 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
CSF3R-209ENST00000469380 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-209ENST00000469380 IFNKQ9P0W0 207 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 ABCB11O95342 1321 aa13.13□□□□□ -0.31
CSF3R-209ENST00000469380 OPLAHO14841 1288 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 PTGS1P23219 599 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 USP14P54578 494 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 UBASH3AP57075 661 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 SV2BQ7L1I2 683 aa13.12□□□□□ -0.31
CSF3R-209ENST00000469380 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
CSF3R-209ENST00000469380 KIAA1524Q8TCG1 905 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms