RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 LBHD1Q9BQE6 289 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 VAT1LQ9HCJ6 419 aa11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 DDX49Q9Y6V7 483 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-215ENST00000469147 CNTNAP5Q8WYK1 1306 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 DNAJC25-GNG10A0A024R161 153 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 hCG_1984214I3L0E3 225 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 CDC27P30260 824 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 FUT2Q10981 343 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 DPP9Q86TI2 863 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 TEX2Q8IWB9 1127 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 ANKRD35Q8N283 1001 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 ZNF713Q8N859 430 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 DDX11Q96FC9 970 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 PIGSQ96S52 555 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 A1CFQ9NQ94 594 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 HOMER2Q9NSB8 354 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
TRAPPC12-215ENST00000469147 MCM3APO60318 1980 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 DLL1O00548 723 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 ST18O60284 1047 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 IFNAR1P17181 557 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 GHRHRQ02643 423 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 USH1GQ495M9 461 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 OLFML2BQ68BL8 750 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 MSL3Q8N5Y2 521 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 CLEC4DQ8WXI8 215 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
TRAPPC12-215ENST00000469147 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 NFIBO00712 420 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 CPLX1O14810 134 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 PFKFB2O60825 505 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 CDKL5O76039 1030 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 PGK2P07205 417 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 CYP2C19P33261 490 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 NTRK3Q16288 839 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 LHX8Q68G74 356 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 CMTR1Q8N1G2 835 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 DEFB123Q8N688 67 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 FGD4Q96M96 766 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 OGDHLQ9ULD0 1010 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 LIMCH1Q9UPQ0 1083 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 PLXNA1Q9UIW2 1896 aa11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-215ENST00000469147 FRMPD3Q5JV73 1810 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 LCTP09848 1927 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 PRPF3O43395 683 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 PTGS1P23219 599 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 BMP8BP34820 402 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 MAGEA10P43363 369 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 MCM2P49736 904 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 CCT2P78371 535 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 SCRN1Q12765 414 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 RNF207Q6ZRF8 634 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 MAML3Q96JK9 1138 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 PURBQ96QR8 312 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 SH2B1Q9NRF2 756 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 ADD3Q9UEY8 706 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 NRBP1Q9UHY1 535 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
TRAPPC12-215ENST00000469147 CEP290O15078 2479 aa11.08□□□□□ -0.64
TRAPPC12-215ENST00000469147 PTPDC1A2A3K4 754 aa11.08□□□□□ -0.64
TRAPPC12-215ENST00000469147 B4DLN1 442 aa11.08□□□□□ -0.64
TRAPPC12-215ENST00000469147 MSCO60682 206 aa11.08□□□□□ -0.64
TRAPPC12-215ENST00000469147 SCG2P13521 617 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms