RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 RPTNQ6XPR3 784 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 EEPD1Q7L9B9 569 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 TMC6Q7Z403 805 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 BHLHE22Q8NFJ8 381 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-207ENST00000468723 COPS5Q92905 334 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 NKX2-4Q9H2Z4 354 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 GCM1Q9NP62 436 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 CYP26B1Q9NR63 512 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 HCFC2Q9Y5Z7 792 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 C7orf72A4D263 438 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 SEMA7AO75326 666 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
GPNMB-207ENST00000468723 ATP2B1P20020 1258 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 GLDCP23378 1020 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 KCNJ6P48051 423 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 EPHB3P54753 998 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 YBX1P67809 324 aaKnown RBP6.11□□□□□ -1.43
GPNMB-207ENST00000468723 JAG1P78504 1218 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 CYP4F3Q08477 520 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 KCNA10Q16322 511 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 SLC10A6Q3KNW5 377 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 MBLAC2Q68D91 279 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 USP33Q8TEY7 942 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 TRIM55Q9BYV6 548 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 CNTD2Q9H8S5 307 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
GPNMB-207ENST00000468723 MBD1Q9UIS9 605 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-207ENST00000468723 ZC3H12DA2A288 527 aaKnown RBP6.1□□□□□ -1.43
GPNMB-207ENST00000468723 F8W031 263 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-207ENST00000468723 ABLIM1O14639 778 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 DBHP09172 617 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
GPNMB-207ENST00000468723 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 RAB33AQ14088 237 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 PRSS53Q2L4Q9 553 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 CKAP2LQ8IYA6 745 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 LZTR1Q8N653 840 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 FRS2Q8WU20 508 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 CD320Q9NPF0 282 aa6.1□□□□□ -1.43
GPNMB-207ENST00000468723 TMEFF2Q9UIK5 374 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-207ENST00000468723 TRBV23OR9-2A0A075B6M9 112 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 NPHS1O60500 1241 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 FUCA1P04066 466 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 CFPP27918 469 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 GRIA2P42262 883 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 CORO7P57737 925 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 TMEM62Q0P6H9 643 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 FZD5Q13467 585 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 INF2Q27J81 1249 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 PLEKHN1Q494U1 663 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-207ENST00000468723 OLFML2BQ68BL8 750 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 PAQR3Q6TCH7 311 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 CILP2Q8IUL8 1156 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 TOX2Q96NM4 488 aa6.09□□□□□ -1.43
GPNMB-207ENST00000468723 DBR1Q9UK59 544 aaKnown RBP6.09□□□□□ -1.43
GPNMB-207ENST00000468723 A0A1W2PQU0 124 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 CCDC85CA6NKD9 419 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 HRKO00198 91 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 AGRPO00253 132 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 CYBBP04839 570 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 HOXC12P31275 282 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 CDR1P51861 262 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 LINC00310P59036 64 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 PPP2R2AP63151 447 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 CBX2Q14781 532 aaPredicted RBP6.08□□□□□ -1.44
GPNMB-207ENST00000468723 NR1I3Q14994 352 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 ZC3H14Q6PJT7 736 aaKnown RBP6.08□□□□□ -1.44
GPNMB-207ENST00000468723 LDHDQ86WU2 507 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 LRRC56Q8IYG6 542 aaPredicted RBP6.08□□□□□ -1.44
GPNMB-207ENST00000468723 NPLOC4Q8TAT6 608 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 C8orf37Q96NL8 207 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 MMP19Q99542 508 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 BCAS3Q9H6U6 928 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 MARCH2Q9P0N8 246 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 CNOT6Q9ULM6 557 aaKnown RBP6.08□□□□□ -1.44
GPNMB-207ENST00000468723 PLA2G2DQ9UNK4 145 aa6.08□□□□□ -1.44
GPNMB-207ENST00000468723 ARNTLO00327 626 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 U2SURPO15042 1029 aaKnown RBP6.07□□□□□ -1.44
GPNMB-207ENST00000468723 MAPKAPK2P49137 400 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 ZNF200P98182 395 aaPredicted RBP6.07□□□□□ -1.44
GPNMB-207ENST00000468723 SSPNQ14714 243 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 CABP7Q86V35 215 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 CCDC103Q8IW40 242 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 TEX2Q8IWB9 1127 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 TMEM145Q8NBT3 493 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 PANK1Q8TE04 598 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 MZB1Q8WU39 189 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 DPF3Q92784 378 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 MTA3Q9BTC8 594 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 EPN3Q9H201 632 aa6.07□□□□□ -1.44
GPNMB-207ENST00000468723 N4BP3O15049 544 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 MEFVO15553 781 aaPredicted RBP6.06□□□□□ -1.44
GPNMB-207ENST00000468723 SRGAP3O43295 1099 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 NUAK1O60285 661 aa6.06□□□□□ -1.44
GPNMB-207ENST00000468723 NTRK1P04629 796 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms