RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 FAM133AQ8N9E0 248 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 TRIM43Q96BQ3 446 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-208ENST00000468459 AGBL1Q96MI9 1066 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-208ENST00000468459 TSEN34Q9BSV6 310 aaKnown RBP17.15■□□□□ 0.34
COL16A1-208ENST00000468459 PDRG1Q9NUG6 133 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-208ENST00000468459 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 A0A1W2PQ45 241 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 A0A1W2PQY0 241 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 ITGB8P26012 769 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 TLE2Q04725 743 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 ACVR2BQ13705 512 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 TMTC2Q8N394 836 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 AGXT2Q9BYV1 514 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 ABHD16BQ9H3Z7 469 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 A1CFQ9NQ94 594 aaKnown RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 PRKAG2Q9UGJ0 569 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-208ENST00000468459 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
COL16A1-208ENST00000468459 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 KLRF2D3W0D1 207 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 DUSP11O75319 330 aaKnown RBP17.13■□□□□ 0.33
COL16A1-208ENST00000468459 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 CNTN2Q02246 1040 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 Q7L0L9 218 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
COL16A1-208ENST00000468459 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
COL16A1-208ENST00000468459 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-208ENST00000468459 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 CST5P28325 142 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 ACLYP53396 1101 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 NKX3-2P78367 333 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 IRX5P78411 483 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 FBXL16Q8N461 479 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 BADQ92934 168 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-208ENST00000468459 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 MTMR10Q9NXD2 777 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 SMCHD1A6NHR9 2005 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 ASTN1O14525 1302 aa17.12■□□□□ 0.33
COL16A1-208ENST00000468459 MOXD2PA6NHM9 499 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 CTAGE5O15320 804 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 ZBTB43O43298 467 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 CYTH3O43739 400 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 SHHQ15465 462 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 C9orf50Q5SZB4 431 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
COL16A1-208ENST00000468459 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 TOX2Q96NM4 488 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
COL16A1-208ENST00000468459 VAT1LQ9HCJ6 419 aa17.11■□□□□ 0.33
COL16A1-208ENST00000468459 DHX16O60231 1041 aaKnown RBP17.1■□□□□ 0.33
COL16A1-208ENST00000468459 CLTBP09497 229 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 CDC27P30260 824 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 NEK4P51957 841 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 AK2P54819 239 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 GJA9P57773 515 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 KCNA10Q16322 511 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-208ENST00000468459 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-208ENST00000468459 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
COL16A1-208ENST00000468459 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-208ENST00000468459 ICAM1P05362 532 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 CALM1P0DP23 149 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 CALM2P0DP24 149 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 CALM3P0DP25 149 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 ALAS1P13196 640 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 KIF5BP33176 963 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms