RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PRO3102Q9H379 93 aa17.64■□□□□ 0.41
ATG4B-215ENST00000468018 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
ATG4B-215ENST00000468018 GNEQ9Y223 722 aaKnown RBP17.64■□□□□ 0.41
ATG4B-215ENST00000468018 NR2E3Q9Y5X4 410 aa17.64■□□□□ 0.41
ATG4B-215ENST00000468018 CALML3P27482 149 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 GJA9P57773 515 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 KRT32Q14532 448 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 C1orf53Q5VUE5 145 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 SYTL5Q8TDW5 730 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-215ENST00000468018 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
ATG4B-215ENST00000468018 MYL10Q9BUA6 226 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 SPZ1Q9BXG8 430 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-215ENST00000468018 VTA1Q9NP79 307 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
ATG4B-215ENST00000468018 MRPL11Q9Y3B7 192 aaKnown RBP17.63■□□□□ 0.41
ATG4B-215ENST00000468018 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-215ENST00000468018 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
ATG4B-215ENST00000468018 KBTBD13C9JR72 458 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 DHX16O60231 1041 aaKnown RBP17.62■□□□□ 0.41
ATG4B-215ENST00000468018 HSD17B4P51659 736 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 DHX32Q7L7V1 743 aaKnown RBP17.62■□□□□ 0.41
ATG4B-215ENST00000468018 RNF180Q86T96 592 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 FBXO16Q8IX29 292 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-215ENST00000468018 PIGSQ96S52 555 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 LRRC2Q9BYS8 371 aa17.62■□□□□ 0.41
ATG4B-215ENST00000468018 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 ADCYAP1R1P41586 468 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 SLC39A5Q6ZMH5 540 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 SAMD3Q8N6K7 520 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-215ENST00000468018 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 PDGFCQ9NRA1 345 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 MAP3K20Q9NYL2 800 aaKnown RBP17.61■□□□□ 0.41
ATG4B-215ENST00000468018 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
ATG4B-215ENST00000468018 RANBP2P49792 3224 aaKnown RBP17.61■□□□□ 0.41
ATG4B-215ENST00000468018 MOXD2PA6NHM9 499 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 REC8O95072 547 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 CALM1P0DP23 149 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 CALM2P0DP24 149 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 CALM3P0DP25 149 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 SMPD1P17405 629 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 KIF5BP33176 963 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 IRX5P78411 483 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-215ENST00000468018 IQSEC1Q6DN90 963 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 C7orf61Q8IZ16 206 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 Q9Y3F1 56 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
ATG4B-215ENST00000468018 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-215ENST00000468018 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
ATG4B-215ENST00000468018 GNAQP50148 359 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 TNFAIP2Q03169 654 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 TMEM63BQ5T3F8 832 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 EEPD1Q7L9B9 569 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 SRBD1Q8N5C6 995 aaKnown RBP17.59■□□□□ 0.41
ATG4B-215ENST00000468018 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
ATG4B-215ENST00000468018 RXRAP19793 462 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 ACLYP53396 1101 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 RCAN1P53805 252 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 RTP1P59025 263 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 TRAF1Q13077 416 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 FANCBQ8NB91 859 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 TCEANC2Q96MN5 208 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
ATG4B-215ENST00000468018 COLQQ9Y215 455 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-215ENST00000468018 C6orf222P0C671 652 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-215ENST00000468018 PTGS1P23219 599 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 ATN1P54259 1190 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-215ENST00000468018 KCNA10Q16322 511 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 TLK2Q86UE8 772 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 PCSK9Q8NBP7 692 aaKnown RBP17.57■□□□□ 0.4
ATG4B-215ENST00000468018 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
ATG4B-215ENST00000468018 FERMT2Q96AC1 680 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 IWS1Q96ST2 819 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 MPHOSPH6Q99547 160 aaKnown RBP17.57■□□□□ 0.4
ATG4B-215ENST00000468018 GDF15Q99988 308 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
ATG4B-215ENST00000468018 NID2Q14112 1375 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 ELP1O95163 1332 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 FRMPD4Q14CM0 1322 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 CFBP00751 764 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 ASGR1P07306 291 aa17.56■□□□□ 0.4
ATG4B-215ENST00000468018 PDE4DQ08499 809 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms