RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 C7orf72A4D263 438 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 TCAF2A6NFQ2 919 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 PPP1R11O60927 126 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-203ENST00000466732 SNRPB2P08579 225 aaKnown RBP6.17□□□□□ -1.42
VPS13D-203ENST00000466732 DBHP09172 617 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 HOXC12P31275 282 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 TMEM62Q0P6H9 643 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 OLFML2BQ68BL8 750 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 MBLAC2Q68D91 279 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 BICRALQ6AI39 1079 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 RPTNQ6XPR3 784 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 CILP2Q8IUL8 1156 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 NPLOC4Q8TAT6 608 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 FRS2Q8WU20 508 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 SIRT5Q9NXA8 310 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 GULP1Q9UBP9 304 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 SMG5Q9UPR3 1016 aaKnown RBP6.17□□□□□ -1.42
VPS13D-203ENST00000466732 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
VPS13D-203ENST00000466732 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 AGRPO00253 132 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 NPHS1O60500 1241 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 CAPNS1P04632 268 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 CYBBP04839 570 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 SCG5P05408 212 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS13D-203ENST00000466732 ECI1P42126 302 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 JAG1P78504 1218 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 NR1I3Q14994 352 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 SF1Q15637 639 aaKnown RBP6.16□□□□□ -1.42
VPS13D-203ENST00000466732 PAQR3Q6TCH7 311 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 TMC6Q7Z403 805 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 ANKLE2Q86XL3 938 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 KRTAP1-3Q8IUG1 177 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 MTA3Q9BTC8 594 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 CNTD2Q9H8S5 307 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 FBLN5Q9UBX5 448 aa6.16□□□□□ -1.42
VPS13D-203ENST00000466732 PPP1R1BQ9UD71 204 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-203ENST00000466732 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 KCNJ6P48051 423 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 MAPKAPK2P49137 400 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 GFRA1P56159 465 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 PPP2R2AP63151 447 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 KCNA10Q16322 511 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 INF2Q27J81 1249 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 PRSS53Q2L4Q9 553 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 PLEKHN1Q494U1 663 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-203ENST00000466732 LZTR1Q8N653 840 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 KREMEN2Q8NCW0 462 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 CCDC140Q96MF4 163 aa6.15□□□□□ -1.42
VPS13D-203ENST00000466732 TMEFF2Q9UIK5 374 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-203ENST00000466732 ARNTLO00327 626 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
VPS13D-203ENST00000466732 CPP00450 1065 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 GLI4P10075 376 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 GRIA2P42262 883 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 CDR1P51861 262 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 EPHB3P54753 998 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 E4F1Q66K89 784 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-203ENST00000466732 IQCEQ6IPM2 695 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 ZC3H14Q6PJT7 736 aaKnown RBP6.14□□□□□ -1.43
VPS13D-203ENST00000466732 TMEM145Q8NBT3 493 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 ST13P5Q8NFI4 369 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-203ENST00000466732 DPF3Q92784 378 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 ARMC5Q96C12 935 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 TOX2Q96NM4 488 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS13D-203ENST00000466732 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 HCFC2Q9Y5Z7 792 aa6.14□□□□□ -1.43
VPS13D-203ENST00000466732 ZC3H12DA2A288 527 aaKnown RBP6.13□□□□□ -1.43
VPS13D-203ENST00000466732 F8W031 263 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-203ENST00000466732 MEFVO15553 781 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-203ENST00000466732 FUCA1P04066 466 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 CFPP27918 469 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-203ENST00000466732 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 CABP7Q86V35 215 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 CCDC103Q8IW40 242 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 DIO2Q92813 273 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 C1orf159Q96HA4 380 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 SGSM3Q96HU1 749 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
VPS13D-203ENST00000466732 HIRIP3Q9BW71 556 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-203ENST00000466732 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 N4BP3O15049 544 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 LINC00310P59036 64 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 RBL2Q08999 1139 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 FZD5Q13467 585 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 HSP90AA2PQ14568 343 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-203ENST00000466732 TESK1Q15569 626 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 DENND5AQ6IQ26 1287 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 C1QL4Q86Z23 238 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 PPIL6Q8IXY8 311 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 NETO2Q8NC67 525 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 USP33Q8TEY7 942 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 MZB1Q8WU39 189 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 IER2Q9BTL4 223 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
VPS13D-203ENST00000466732 MARCH2Q9P0N8 246 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms