RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 TBC1D5Q92609 795 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 ZMYND12Q9H0C1 365 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 SH3GLB2Q9NR46 395 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 HOMER2Q9NSB8 354 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 PNMA3Q9UL41 463 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 KIAA1217Q5T5P2 1943 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 BTBD18B2RXH4 712 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 H3BQV1 296 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 F13A1P00488 732 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 OSBPP22059 807 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 CLK2P49760 499 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 OAZ1P54368 228 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 NLRP5P59047 1200 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 FAM173BQ6P4H8 233 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 ANKRD13CQ8N6S4 541 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 MB21D1Q8N884 522 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 PARK7Q99497 189 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 SPATC1LQ9H0A9 340 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 PORCNQ9H237 461 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 RIC8AQ9NPQ8 531 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 RNF146Q9NTX7 359 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 HOXC10Q9NYD6 342 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 MORF4L1Q9UBU8 362 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 PTPN22Q9Y2R2 807 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 TRIM17Q9Y577 477 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 PTCH2Q9Y6C5 1203 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 ABCB11O95342 1321 aa10.31□□□□□ -0.76
NUDCD3-204ENST00000464812 DOCK5Q9H7D0 1870 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 SMCO2A6NFE2 343 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 WNT7AO00755 349 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 MEIS2O14770 477 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 FDX1P10109 184 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 KRT2P35908 639 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 ADCY7P51828 1080 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 ERVK-24P63145 666 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 TRIM29Q14134 588 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 PLS1Q14651 629 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 SLC30A10Q6XR72 485 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 BLIDQ8IZY5 108 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 SMCR8Q8TEV9 937 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 TRERF1Q96PN7 1200 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 CHMP5Q9NZZ3 219 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 COL20A1Q9P218 1284 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 PCDHA6Q9UN73 950 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 PCDHA8Q9Y5H6 950 aa10.3□□□□□ -0.76
NUDCD3-204ENST00000464812 XBP1P17861 261 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.764e-9■■■□□ 19.2
NUDCD3-204ENST00000464812 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 STAT3P40763 770 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 PSMC4P43686 418 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 GHRHRQ02643 423 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 PRKCZQ05513 592 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 FAM110CQ1W6H9 321 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 MCTP1Q6DN14 999 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 FBXO46Q6PJ61 603 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 RIOX2Q8IUF8 465 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 ERO1AQ96HE7 468 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 EFCC1Q9HA90 598 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 BIN2Q9UBW5 565 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 ASTN1O14525 1302 aa10.29□□□□□ -0.76
NUDCD3-204ENST00000464812 EDIL3O43854 480 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 CFBP00751 764 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 IGHA2P01877 340 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 ERCC3P19447 782 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 HSD17B4P51659 736 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 NUCB2P80303 420 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 NBR1Q14596 966 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 REXO1Q8N1G1 1221 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 GTF3C2Q8WUA4 911 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 USP6NLQ92738 828 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 TNPO1Q92973 898 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 CUL5Q93034 780 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 FOXP1Q9H334 677 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 A1CFQ9NQ94 594 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 SRRDQ9UH36 339 aa10.28□□□□□ -0.76
NUDCD3-204ENST00000464812 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms