RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 B4DLN1 442 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 DLL1O00548 723 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 ZBTB5O15062 677 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 DHX16O60231 1041 aaKnown RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 DUSP11O75319 330 aaKnown RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 TAL1P17542 331 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 GNAQP50148 359 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 MRPL12P52815 198 aaKnown RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 GHRHRQ02643 423 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 BAATQ14032 418 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 QRICH1Q2TAL8 776 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 RNF180Q86T96 592 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 SGMS1Q86VZ5 419 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 ZNF654Q8IZM8 581 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 STAG2Q8N3U4 1231 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 CTCFLQ8NI51 663 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 NEK1Q96PY6 1258 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 KATNBL1Q9H079 304 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 CPVLQ9H3G5 476 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 SENP2Q9HC62 589 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 XPNPEP3Q9NQH7 507 aa8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 MAP3K20Q9NYL2 800 aaKnown RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 ZHX1Q9UKY1 873 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-208ENST00000464045 ASTN1O14525 1302 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 PNMA6FA0A0J9YX94 578 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 EIF5BO60841 1220 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 CST5P28325 142 aaPredicted RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 HSPA4P34932 840 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 RCAN1P53805 252 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 RPS6P62753 249 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 NKX3-2P78367 333 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 LRRC41Q15345 812 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 CCDC144BQ3MJ40 725 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 USH1GQ495M9 461 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 IQSEC1Q6DN90 963 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 NFXL1Q6ZNB6 911 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 SPZ1Q9BXG8 430 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 Q9Y3F1 56 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 SLC12A7Q9Y666 1083 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 PLXNA1Q9UIW2 1896 aa8.63□□□□□ -1.03
THUMPD3-208ENST00000464045 ZNFX1Q9P2E3 1918 aaKnown RBP8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 SYNRGQ9UMZ2 1314 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 PRUNE2Q8WUY3 3088 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 ADAMTS4O75173 837 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 EDNRBP24530 442 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 CALML3P27482 149 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 MAGEA10P43363 369 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 GJA9P57773 515 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 SYNE3Q6ZMZ3 975 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 RASEFQ8IZ41 740 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 FBXL16Q8N461 479 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 DEFB123Q8N688 67 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 NSUN6Q8TEA1 469 aaKnown RBP8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 NUP133Q8WUM0 1156 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 IWS1Q96ST2 819 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 VAT1LQ9HCJ6 419 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 PCDHA1Q9Y5I3 950 aa8.62□□□□□ -1.03
THUMPD3-208ENST00000464045 FRMPD3Q5JV73 1810 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 RBM47A0AV96 593 aaKnown RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 CYTH3O43739 400 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PPP1R11O60927 126 aaPredicted RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PGK1P00558 417 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PSMA5P28066 241 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 HSD17B4P51659 736 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PDE4DQ08499 809 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 SNX17Q15036 470 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PPP2R5BQ15173 497 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 LRRC26Q2I0M4 334 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 SLC35G1Q2M3R5 365 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 ADCK5Q3MIX3 580 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 ANO1Q5XXA6 986 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 APOA5Q6Q788 366 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 FANCBQ8NB91 859 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PCSK9Q8NBP7 692 aaKnown RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 RRP36Q96EU6 259 aaKnown RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 PIGSQ96S52 555 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 GDF15Q99988 308 aa8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
THUMPD3-208ENST00000464045 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms