RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
SKA3-204ENST00000462482 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
SKA3-204ENST00000462482 NFIBO00712 420 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 SUPT20HL2P0C7V6 817 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 PDHBP11177 359 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 NT5C2P49902 561 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 GRIN2CQ14957 1233 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 RAB30Q15771 203 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
SKA3-204ENST00000462482 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
SKA3-204ENST00000462482 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 DDX49Q9Y6V7 483 aaKnown RBP18.07■□□□□ 0.48
SKA3-204ENST00000462482 DNAH12Q6ZR08 3092 aa18.07■□□□□ 0.48
SKA3-204ENST00000462482 SMCHD1A6NHR9 2005 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 ZNF213O14771 459 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 C16orf59Q7L2K0 433 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
SKA3-204ENST00000462482 IQCA1Q86XH1 822 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 PURBQ96QR8 312 aaKnown RBP18.06■□□□□ 0.48
SKA3-204ENST00000462482 TRPV6Q9H1D0 765 aa18.06■□□□□ 0.48
SKA3-204ENST00000462482 WDR19Q8NEZ3 1342 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 NKRFO15226 690 aaKnown RBP eCLIP18.05■□□□□ 0.48
SKA3-204ENST00000462482 MYL3P08590 195 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 CCL23P55773 120 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 PSMC6P62333 389 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 RASIP1Q5U651 963 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 OR6J1Q8NGC5 347 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 HERVK_113Q902F9 699 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 SYMPKQ92797 1274 aaKnown RBP18.05■□□□□ 0.48
SKA3-204ENST00000462482 PBX4Q9BYU1 374 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 COL6A3P12111 3177 aa18.05■□□□□ 0.48
SKA3-204ENST00000462482 HIP1O00291 1037 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 B4GALT4O60513 344 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 SDSP20132 328 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 SLC30A10Q6XR72 485 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 DGKHQ86XP1 1220 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 DNERQ8NFT8 737 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 MTG1Q9BT17 334 aaPredicted RBP18.04■□□□□ 0.48
SKA3-204ENST00000462482 NOC4LQ9BVI4 516 aaKnown RBP18.04■□□□□ 0.48
SKA3-204ENST00000462482 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
SKA3-204ENST00000462482 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
SKA3-204ENST00000462482 KPNA6O60684 536 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 RPS6P62753 249 aaKnown RBP18.03■□□□□ 0.48
SKA3-204ENST00000462482 FAM47CQ5HY64 1035 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 CLEC4DQ8WXI8 215 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 SLC28A3Q9HAS3 691 aa18.03■□□□□ 0.48
SKA3-204ENST00000462482 GRIN2DO15399 1336 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 RBM47A0AV96 593 aaKnown RBP18.02■□□□□ 0.48
SKA3-204ENST00000462482 ZBBXA8MT70 800 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 GRXCR1A8MXD5 290 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 SNHG28P0DPA3 235 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 PTGS1P23219 599 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 PBX2P40425 430 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 USH1GQ495M9 461 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 TMEM63BQ5T3F8 832 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
SKA3-204ENST00000462482 OTOP2Q7RTS6 562 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 ZKSCAN3Q9BRR0 538 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 MAF1Q9H063 256 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 SLC4A7Q9Y6M7 1214 aa18.02■□□□□ 0.48
SKA3-204ENST00000462482 TNKSO95271 1327 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 UMODL1Q5DID0 1318 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
SKA3-204ENST00000462482 PFKMP08237 780 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 GOLGA8HP0CJ92 632 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 TXNP10599 105 aaKnown RBP18.01■□□□□ 0.47
SKA3-204ENST00000462482 PURAQ00577 322 aaKnown RBP18.01■□□□□ 0.47
SKA3-204ENST00000462482 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
SKA3-204ENST00000462482 MCF2L2Q86YR7 1114 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 PNMA1Q8ND90 353 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 CTNNA3Q9UI47 895 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 NOD1Q9Y239 953 aa18.01■□□□□ 0.47
SKA3-204ENST00000462482 NEDD4P46934 1319 aa18■□□□□ 0.47
SKA3-204ENST00000462482 KDM4AO75164 1064 aa18■□□□□ 0.47
SKA3-204ENST00000462482 ACTN1P12814 892 aa18■□□□□ 0.47
SKA3-204ENST00000462482 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
SKA3-204ENST00000462482 RETREG2Q8NC44 543 aa18■□□□□ 0.47
SKA3-204ENST00000462482 UBA5Q9GZZ9 404 aa18■□□□□ 0.47
SKA3-204ENST00000462482 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
SKA3-204ENST00000462482 PRDM12Q9H4Q4 367 aa18■□□□□ 0.47
SKA3-204ENST00000462482 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
SKA3-204ENST00000462482 ABCB11O95342 1321 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 CUL9Q8IWT3 2517 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 EDNRBP24530 442 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 NUCB1Q02818 461 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
SKA3-204ENST00000462482 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 PPM1EQ8WY54 764 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 SCLYQ96I15 445 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms