RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CALML3P27482 149 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 NAPAP54920 295 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
CPNE1-221ENST00000462352 CNTN2Q02246 1040 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 GHRHRQ02643 423 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 CCL14Q16627 93 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 FAM133AQ8N9E0 248 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 MCOLN1Q9GZU1 580 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 DIS3Q9Y2L1 958 aaKnown RBP13.59□□□□□ -0.23
CPNE1-221ENST00000462352 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 ADCY3O60266 1144 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 FDPSP14324 419 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 ELNP15502 786 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 HSD17B4P51659 736 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 TRIB2Q92519 343 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 MAML3Q96JK9 1138 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 FGD4Q96M96 766 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 LLPHQ9BRT6 129 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 MAP3K20Q9NYL2 800 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 FLRT1Q9NZU1 646 aa13.58□□□□□ -0.24
CPNE1-221ENST00000462352 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 ZNFX1Q9P2E3 1918 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.24
CPNE1-221ENST00000462352 SOWAHBA6NEL2 793 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-221ENST00000462352 GRK4P32298 578 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
CPNE1-221ENST00000462352 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-221ENST00000462352 SNX21Q969T3 373 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 COL20A1Q9P218 1284 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 ASTN1O14525 1302 aa13.57□□□□□ -0.24
CPNE1-221ENST00000462352 SMCO2A6NFE2 343 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 K7ELQ4 463 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-221ENST00000462352 PIK3CDO00329 1044 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 MEIS2O14770 477 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 IGHA2P01877 340 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 ADCY7P51828 1080 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 USP17L6PQ6QN14 398 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 ZNF467Q7Z7K2 595 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-221ENST00000462352 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-221ENST00000462352 WASF1Q92558 559 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 CUL5Q93034 780 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 ALG1Q9BT22 464 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 ADD3Q9UEY8 706 aaKnown RBP13.56□□□□□ -0.24
CPNE1-221ENST00000462352 LCTP09848 1927 aa13.56□□□□□ -0.24
CPNE1-221ENST00000462352 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 HMGCRP04035 888 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 ALDH5A1P51649 535 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-221ENST00000462352 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
CPNE1-221ENST00000462352 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
CPNE1-221ENST00000462352 UBE2SQ16763 222 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 MAMDC4Q6UXC1 1216 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 FCHSD1Q86WN1 690 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 DNERQ8NFT8 737 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 HTTP42858 3142 aa13.55□□□□□ -0.24
CPNE1-221ENST00000462352 ASB14A6NK59 587 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 INHAP05111 366 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 XBP1P17861 261 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 CYP2C19P33261 490 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 NLRP5P59047 1200 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 TRIM32Q13049 653 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 CUL4AQ13619 759 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-221ENST00000462352 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
CPNE1-221ENST00000462352 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-221ENST00000462352 DDX49Q9Y6V7 483 aaKnown RBP13.54□□□□□ -0.24
CPNE1-221ENST00000462352 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
CPNE1-221ENST00000462352 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms